Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc16720g00001 ATGAGCAAGCTGAACCACCCGAACATCGTGAAGCTGCACGAGGTGCTGGCGACGAAGACGAAGATCTATTTCGTGTTGGAGTTCGTCAAAGGCGGTGAGCTATTTGCCAAGGTTTCCAAAGGCAGGTTCAGCGAGGATCTCAGCCGCAAGTATTTCCAGCAGCTTATCTCCGCCGTAGGGTACTGTCACTCGCGCGGCGTTTTCCACCGTGATTTGAAG 219 0.5342 MSKLNHPNIVKLHEVLATKTKIYFVLEFVKGGELFAKVSKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLK 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc16720g00001 73 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Stsc16720g00001 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc16720g00001 73 Pfam Protein kinase domain 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc16720g00001 73 SUPERFAMILY Protein kinase-like (PK-like) 1 73 IPR011009 -
Stsc16720g00001 73 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc16720g00001 Stsc-Chr16720 3 230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc16720g00001 1 73 CBL-interacting serine-threonine protein kinases AT5G01820 82.192 5.54e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc16720g00001 Pkinase 3.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc16720g00001 - - adu:110274956 148.673