Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc167059g00001 ATGCTAGGAAAAGGTGGGTTCGGAACGGCGTACAAAGCGGTTCTTGATGATGGGAACGTTGTTGCGGTGAAGAGGCTGAAAGATGCGCAGATTGGAGGGAAGAGAGAATTCGAGCAGCACATGGAGCTTCTTGGAAGGTTGAGGCACCAAAATATAGTGAGCTTGAGAGCTTACTATTTTGCGAGGGATGAGAAGTTGTTG 201 0.4826 MLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIGGKREFEQHMELLGRLRHQNIVSLRAYYFARDEKLL 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc167059g00001 67 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
Stsc167059g00001 67 ProSitePatterns Protein kinases ATP-binding region signature. 2 24 IPR017441 GO:0005524
Stsc167059g00001 67 ProSiteProfiles Protein kinase domain profile. 1 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc167059g00001 67 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 67 IPR046959 -
Stsc167059g00001 67 Pfam Protein kinase domain 2 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc167059g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 1 63 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc167059g00001 Stsc-Chr167059 6 206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc167059g00001 1 67 Receptor kinase-like Gene Family AT1G68400 80.882 4.05e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc167059g00001 Pkinase 7.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc167059g00001 - - zju:107429391 130.568