Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc166g00001 ATGCAATTTTTTCACATTCCCTACCATTATTCCAACACCAATACCATGACCAAACTCAGCAATCTCACTCTCAATCTCAATCTCACAACCTCCCAACAAAACCTTCTTCTTCCCAATGGAAAGACCATTTTCACACTCAGTCTCTTCCTAATGCAACATATCCAAATGTTGGAGATTCTTCTAGCAATCACTGTCTTCATAGTGATTCATTCTCTAAGGCAAAAGAAGCATTATGGCTTGCCAAATTGGCCTCTTCTTGGAATGTTACCTTCTTTGTTCTTTGGACTAAGAGGTAACATGTATGAATGGATCACTGATGTTCTCAACAAGAAAAATGGTACATTCAAATTCAAAGGGCCTTGGTTTAGCAACCTCAACTGCGTTGTCACGGCCGATCCGCGAAACCTCGAGCATCTTCTCAAGACAAAGTTTTCTTTGTTTCCTAAAGGGAGGTACTTCAGGGACACGGTTAGAGACCTACTTGGAGATGGAATCTTCAACGCCGACGACGAGACATGGCAGAAGCAGAGGAAGACAGCAAGCCTTGAGTTCCACTCAACAAAATTCAGGAAGTTAACTACTGAATCCTTGTTTGAGCTTGTTCATTCGAGGCTCTTACCGGTCTTAGAATCCGCGGTTAAGCAGAATGTTTCCATTGATTTACAGGACATTTTGCTGAGACTAACTTTTGATAATGTTTGCTTGATTGCATTCGGTGTTGATCCCGGTTGCTTGCGGCCGGGGTTACCTAAAATACCATTTGCAAAGGCCTTTGAGGATGCAACAGAAGCAACAGTTCTTAGATTCATTTCCCCAACATGTGTATGGAAGGCAATGAGGTTCCTCAACTTGGGGATGGAGAAAAAGCTGAAGGAATCCATAAAAGGGGTTGATGAGTTTGCTGAGAATGTTATCAGGACAAGAAAGAAAGAACTGTCTTTGTACTGTGATGACAAGAATGGTGAGAAGCAAAGATCAGATCTGTTAACAATTTTCATGGGGCTGAAGGATGAGAATGGAGAAGCTTATTCAGATAAGTTCTNNNNNNNNNNTGGAAGAGACACTTCTTCTGTGGCTTTGAGCTGGTTTTTCTGGCTGCTTGATCAGAACCCTGAAGTGGAAGAGAAGATAGTAGAAGAGATATGCAGGGTAGTGAAACAGAGAGAAGACATGGATATGAATGTGAGTATGAAGAAAGAAGAGTTTATTGAGGGTTTGACATTTAGGCCTGAAGAGATTAAGAAGATGGATTATCTGCATGCTGCTCTTTCTGAAGCTCTTAGATTGTACCCTTCTGTTCCTGTTGATCACAAAGAGGTAGTTGAAGATGACACATTCCCAGATGGAACAATGCTCAAGAAGGGGACAAAAGTGATCTATGCAATTTACTCAATGGGGAGAATGGAAGCCATATGGGGAAAAGATTGTAGAGAATTCAAGCCAGAAAGATGGCTAAGAGACAATGCACGCTTCATGAGTGAATCTGCATACAAATTCACTGCCTTTAATGGCGGCCCGCGCCTCTGCTTAGGCAAAGACTTTGCTTACTATCAGATGAAATATGCCGCCGCGAGCATCATATTCCGCTACCATGTTAAGACGGTGGAAAACCACCCTGTGGTGCCTAAGCTTGCATTGACTATGTACATGAAACATGGTATCAAAGTTAACCTTTACAAGAGGGATGCAGAAGAGATTCAGAAGTACTTTCATGGTTGA 1719 0.4183 MQFFHIPYHYSNTNTMTKLSNLTLNLNLTTSQQNLLLPNGKTIFTLSLFLMQHIQMLEILLAITVFIVIHSLRQKKHYGLPNWPLLGMLPSLFFGLRGNMYEWITDVLNKKNGTFKFKGPWFSNLNCVVTADPRNLEHLLKTKFSLFPKGRYFRDTVRDLLGDGIFNADDETWQKQRKTASLEFHSTKFRKLTTESLFELVHSRLLPVLESAVKQNVSIDLQDILLRLTFDNVCLIAFGVDPGCLRPGLPKIPFAKAFEDATEATVLRFISPTCVWKAMRFLNLGMEKKLKESIKGVDEFAENVIRTRKKELSLYCDDKNGEKQRSDLLTIFMGLKDENGEAYSDKFXXXXGRDTSSVALSWFFWLLDQNPEVEEKIVEEICRVVKQREDMDMNVSMKKEEFIEGLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTMLKKGTKVIYAIYSMGRMEAIWGKDCREFKPERWLRDNARFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYHVKTVENHPVVPKLALTMYMKHGIKVNLYKRDAEEIQKYFHG 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc166g00001 572 Gene3D Cytochrome P450 67 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 FunFam Cytochrome P450 71 564 - -
Stsc166g00001 572 PANTHER CYTOCHROME P450 68 555 - -
Stsc166g00001 572 PRINTS P450 superfamily signature 351 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 PRINTS P450 superfamily signature 509 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 PRINTS P450 superfamily signature 500 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 Pfam Cytochrome P450 81 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 CDD CYP86A 115 553 - -
Stsc166g00001 572 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 502 511 IPR017972 GO:0005506|GO:0016705
Stsc166g00001 572 PRINTS E-class P450 group I signature 509 532 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 PRINTS E-class P450 group I signature 499 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 PRINTS E-class P450 group I signature 360 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 PRINTS E-class P450 group I signature 420 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc166g00001 572 SUPERFAMILY Cytochrome P450 79 561 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc166g00001 Stsc-Chr166 1448 4553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc166g00001 48 570 Cytochrome P450 AT5G23190 72.128 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc166g00001 K15402 - gmx:100809503 866.685