Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc1659g00001 | ATGGCCTCTCATCTAATTCACCATCATCCACTTGTTGGAATAATAATAATAATCCCTCTCTTTTTGGTTATAATGGAAGATCAGAGAACAGGTGTTGATCCTTTAGCACAGATACAAGAAAGGTGCATTTGCATTGTTAAAACTCACCAAGTTCATCATGAGGGATGCGTACTTTGTAGGCAACAATATTTTAGCAAAATCTTTAGTCCCCAAACTATGATGATTTGTGATCAGTGTAAAAAGGAATATCATGTTGGGTGTAAAAAGGACCATAACATACAGAACCTAGAGAATTGCTAG | 300 | 0.36 | MASHLIHHHPLVGIIIIIPLFLVIMEDQRTGVDPLAQIQERCICIVKTHQVHHEGCVLCRQQYFSKIFSPQTMMICDQCKKEYHVGCKKDHNIQNLENC | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc1659g00001 | 99 | PANTHER | AUTOIMMUNE REGULATOR | 29 | 97 | - | - | |
| Stsc1659g00001 | 99 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 49 | 98 | IPR013083 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc1659g00001 | Stsc-Chr1659 | 8794 | 9653 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc1659g00001 | 28 | 97 | PHD Transcription Factor Family | AT2G36720 | 47.887 | 2.35e-18 | 76.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc1659g00001 | - | - | aprc:113859749 | 102.449 |