Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc163697g00001 ATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAATACAGGAAGCTGGCCCTCTCTCTCCACCCCGATAAAAACAAGTGTTTAGGTGCAGAGGGTGCATTCAAGCTGGTTTCAGAGGCATGGAGTTTGCTATCAGACAAGACCAAGAGACTAGAATATAACCAAAAGAGGAGTTCAAAAG 208 0.4471 MDWYGILGVSPFADEETVRKQYRKLALSLHPDKNKCLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSSK 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc163697g00001 69 PANTHER BNAC03G44070D PROTEIN 1 67 - -
Stsc163697g00001 69 Gene3D DnaJ domain 1 69 IPR036869 -
Stsc163697g00001 69 ProSiteProfiles dnaJ domain profile. 2 66 IPR001623 -
Stsc163697g00001 69 Pfam DnaJ domain 2 63 IPR001623 -
Stsc163697g00001 69 CDD DnaJ 2 55 IPR001623 -
Stsc163697g00001 69 SUPERFAMILY Chaperone J-domain 1 65 IPR036869 -
Stsc163697g00001 69 ProSitePatterns Nt-dnaJ domain signature. 43 62 IPR018253 -
Stsc163697g00001 69 PRINTS DnaJ domain signature 22 37 IPR001623 -
Stsc163697g00001 69 PRINTS DnaJ domain signature 38 58 IPR001623 -
Stsc163697g00001 69 PRINTS DnaJ domain signature 4 22 IPR001623 -
Stsc163697g00001 69 PRINTS DnaJ domain signature 58 69 IPR001623 -
Stsc163697g00001 69 SMART dnaj_3 1 58 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc163697g00001 Stsc-Chr163697 93 300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc163697g00001 2 63 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.424 1.01e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc163697g00001 - - adu:107460588 143.665