LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc1633g00001	ATGACAAATCTCAATCTTGTTGTCTGTAGTGTGATGATCACCACTTTAGCATTCACACTTTTCACTTGTGATGCTAATAACAACAATGATGATAATCCAAAACTTCATATTGTTTACATGGGCTCTTTACCTGAAACAACAAATTCTTACTCTCCAACTTCTCACCATCTCAACTTGCTGCAACAAGTTATTGGTGATAGCAACCCAGCAAATTTCTTAGTCCGTAGCTACAAAAGGAGTTTTAATGGCTTTGCTGCTTTGCTCACAAATGAGCAAGTAGCAAAGTTAGCAGAAATGGAAGATGTTGTGTCAGTTTTTCCAAGCATAACATTCCAAACCCAAACAACAAGATCATGGGATTTCTTAGGAGTTCCCAAGGCGGCAAGAAGACAGCCAAAAAGCATAGAAAGCAACCTTGTTGTGGGAGTTCTCGACTCTAGAATCTGGCCGGAATCAGAAAGCTTCAATGACAAAGATTTCACTGACCCTGTTCCAAAGAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAACTTCACATGCAACAAGAAGCTAATTGGAGCAAGATTCTACATAGATGACTCTGCAAGAGACCGTGTAGGCCATGGAAGCCATACAGCATCAATAGCAGCAGGAAACTATGTTGATAATGTTGCCTTTTTTGGCATTGCACAAGGCACTGCCAGAGGAGCAGTTCCTTCTGCAAGAATTGCTGCTTATAAAATCTGTAAGGAACAAGACTGTGCTGGTGCTGCCATCTTTGCCGCCTTTGATGATGCAATTGCTGATGGAGTTGACATCATTTCCATTTCAGTTGGTAATACATTCCCACAGAGTCTAGAAACTGATACTATTGTCATTGGTGCCTTTCAGGCTATGGCCAAAGGTGTACTTGTATCCCAGTCAGCTGGTAATTCCGGTCCATTACCTTCCTCTGTAGCAAGCGTAGCGCCGTGGTTGTTAAGTGTAGCAGCAAACACTATAGACCGCCAGATCGTTGACAAGGTGGTTCTCGGCAACGGAAAAGTATTGACTGGGAACTCAGTTAATTCTTTCAAGTCGAACGGAAAGAAAGTTCCTATAGCATTGGGTAACGGCAATTCAAATGAGTGTCCGAAAGAATCTGCTGATCAATGCACATGTTTGGATCGAAATTTGGTGAAAGGAAAGATAGTTTTGTGCGACAAATTTAACGATGCTGCACCCAAATTTATTGGTGCAGCTGGTGCAGTTGTAAATCTTGATACTGCTAATGTGGGTTATGTGACATTATTGCCATTAGTGGCATTGCTACCAAATGATTTTGAATTGATTAAATCCTACATAAACTCAACAAAAGATCCAAGAGCTGAGATTCTCAAGAGTGAGGTTGCTAGAGATCGTAATGCTCCTAAAGTGGCAAAATTTTCTTCACGTGGACCAAACATCCTCATTCCAGAGATCTTGAAACCTGATGTAAGTGCCCCAGGAGTTAATATATTGGCTGCTTATTCTCCAATTTCTACACCAACAGAAGATCTTGTTAATGATAACAGATCTGTGAATTACAGCATTATGAGTGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCACATATGTGAAGAGCTTTCACCCTGATTGGTCACCTGCTGCAATTAAATCTGCTATTCTGACATCAGCAACACCCATGGTTAGAAGCTCTGTGCATGATGTTGGAGAATATGGATATGGATCTGGACAAGCCAATCCAGTTCAAGCACTCAACCCTGGACTGGTTTATGACATTAACAAGGGAGATTATGTGCAAATGCTCTGTAACTTAGGGTATGATAATGACTCAATTAAGTTGATATCTGGAGATGTTAATCCATGCAAGGGAGCTGCTGATAGATCATTGGTAAGAAACTTAAATTATCCAACATTTGCAGCTCGGATTCTACCCAATGTGACTTTTAACATAAGTTTTGGTAGAACAGTTACAAATGTTGGGTTAGCCAATTCAAGTTACAGGGTAACAGTCACACCGAATCCAGAAGTTAAGATCACAGTGACACCAACGTTTTTGTCATTCAAAGCATTAAACGAGAACAAATCGTTTGTAGTGAATGTGAGTGGTAAGGTACCAAGAAAAAGTGTGGTTATCTCATCAATAATATGGTCAGATAGAACCCATAATGTTAGAAGCCCAATTGTTATAGATGTTTCATCAGGTGATCAGAAATGA	2208	0.4049	MTNLNLVVCSVMITTLAFTLFTCDANNNNDDNPKLHIVYMGSLPETTNSYSPTSHHLNLLQQVIGDSNPANFLVRSYKRSFNGFAALLTNEQVAKLAEMEDVVSVFPSITFQTQTTRSWDFLGVPKAARRQPKSIESNLVVGVLDSRIWPESESFNDKDFTDPVPKKWKGTCAGGKNFTCNKKLIGARFYIDDSARDRVGHGSHTASIAAGNYVDNVAFFGIAQGTARGAVPSARIAAYKICKEQDCAGAAIFAAFDDAIADGVDIISISVGNTFPQSLETDTIVIGAFQAMAKGVLVSQSAGNSGPLPSSVASVAPWLLSVAANTIDRQIVDKVVLGNGKVLTGNSVNSFKSNGKKVPIALGNGNSNECPKESADQCTCLDRNLVKGKIVLCDKFNDAAPKFIGAAGAVVNLDTANVGYVTLLPLVALLPNDFELIKSYINSTKDPRAEILKSEVARDRNAPKVAKFSSRGPNILIPEILKPDVSAPGVNILAAYSPISTPTEDLVNDNRSVNYSIMSGTSMSCPHVSGIATYVKSFHPDWSPAAIKSAILTSATPMVRSSVHDVGEYGYGSGQANPVQALNPGLVYDINKGDYVQMLCNLGYDNDSIKLISGDVNPCKGAADRSLVRNLNYPTFAARILPNVTFNISFGRTVTNVGLANSSYRVTVTPNPEVKITVTPTFLSFKALNENKSFVVNVSGKVPRKSVVISSIIWSDRTHNVRSPIVIDVSSGDQK	735

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc1633g00001	735	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	113	IPR037045	-
	Stsc1633g00001	735	Gene3D	-	328	458	-	-
	Stsc1633g00001	735	SUPERFAMILY	Subtilisin-like	114	586	IPR036852	GO:0004252\|GO:0006508
	Stsc1633g00001	735	Pfam	Peptidase inhibitor I9	36	113	IPR010259	-
	Stsc1633g00001	735	Pfam	Fibronectin type-III domain	630	727	IPR041469	-
	Stsc1633g00001	735	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	37	726	IPR045051	-
	Stsc1633g00001	735	PRINTS	Subtilisin serine protease family (S8) signature	197	210	IPR015500	-
	Stsc1633g00001	735	PRINTS	Subtilisin serine protease family (S8) signature	136	155	IPR015500	-
	Stsc1633g00001	735	PRINTS	Subtilisin serine protease family (S8) signature	519	535	IPR015500	-
	Stsc1633g00001	735	ProSitePatterns	Serine proteases, subtilase family, serine active site.	520	530	IPR023828	-
	Stsc1633g00001	735	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	582	-	-
	Stsc1633g00001	735	Pfam	Subtilase family	137	564	IPR000209	GO:0006508\|GO:0008236
	Stsc1633g00001	735	CDD	PA_subtilisin_like	335	451	-	-
	Stsc1633g00001	735	CDD	Peptidases_S8_3	111	556	IPR034197	-
	Stsc1633g00001	735	Gene3D	-	599	730	-	-
	Stsc1633g00001	735	Gene3D	Peptidase S8/S53 domain	139	595	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc1633g00001	Stsc-Chr1633	8498	10705	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc1633g00001	25	727	Subtilisin-like Serine Gene Family	AT5G59100	50.488	0.0	707

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc1633g00001	-		-	psat:127076787	773.852