Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc162951g00001 ATGGAAGGAAAAGATCCAGTTAAGGTGATCAGAGATGCACTCTCAAGAACACTTGTGTTCTACTACCCACTTGCCGGTAGACTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACCGCAGAGGGTGTCTTGTTCATCGAGGCCGATGCTGACGTGGCAATTGATCAACTTG 178 0.5 MEGKDPVKVIRDALSRTLVFYYPLAGRLREGHGRKLMVDCTAEGVLFIEADADVAIDQL 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc162951g00001 59 Gene3D - 1 59 IPR023213 -
Stsc162951g00001 59 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 55 - -
Stsc162951g00001 59 Pfam Transferase family 6 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc162951g00001 Stsc-Chr162951 76 253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc162951g00001 5 59 Monolignol Biosynthesis Gene Families AT5G48930 43.636 7.50e-11 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc162951g00001 K19861 - pvy:116120760 100.138