Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc162616g00001 ACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGCGTAGGCGGATCAACTCATCAAGTTCCCGTTGAAATAGGATCCGCACAAGGAAAAGCACTTGCCATTCGTTGGTTATTGGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGTAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA 309 0.4434 TETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSAQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc162616g00001 102 Pfam Ribosomal protein S7p/S5e 2 96 IPR023798 -
Stsc162616g00001 102 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 102 IPR000235 GO:0006412
Stsc162616g00001 102 PANTHER RIBOSOMAL PROTEIN S7 1 96 IPR000235 GO:0006412
Stsc162616g00001 102 NCBIfam 30S ribosomal protein S7 2 102 IPR005717 GO:0003735|GO:0006412|GO:0015935
Stsc162616g00001 102 SUPERFAMILY Ribosomal protein S7 1 96 IPR036823 -
Stsc162616g00001 102 Gene3D Ribosomal protein S7 domain 1 102 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc162616g00001 Stsc-Chr162616 13 321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc162616g00001 1 96 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 34.951 2.16e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc162616g00001 K02992 - cave:30215261 200.675