Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc162188g00001 ATGGATGACGGAGATGCAGTGGAAGATGGTGATGGTCAAGGGGTGTATGCGGATGCTAATGGTGCACAACAACCATTGACATATACATTGGAGGAAGTTATGAAAATGGAGTTTGAGAATCCAGAGGCGGCTATTCGTTTTTATGAAGCCTATAGTAGAGCAATGGGGTTTTCAATGCGTCATGGCAGGAAGCTAAGGAACAAGGCCGGTGAAGTGGTACGATACACTTTTTTGTGTAATCGCGAAGGGTTTAGA 255 0.4471 MDDGDAVEDGDGQGVYADANGAQQPLTYTLEEVMKMEFENPEAAIRFYEAYSRAMGFSMRHGRKLRNKAGEVVRYTFLCNREGFR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc162188g00001 85 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 85 - -
Stsc162188g00001 85 Pfam FAR1 DNA-binding domain 46 85 IPR004330 -
Stsc162188g00001 85 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc162188g00001 Stsc-Chr162188 3 432 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc162188g00001 FAR1 4.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc162188g00001 - - aip:107647209 97.4413