Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc161g00009 ATGGCGACGAGAGTAGTGGGAGTTAGCATAACCGCCGCAATGATCTCGGTTCAGTTCTTGGAGGTTGGATTGAACACTCTTGTCAAATCCGCCACAACCAACGGAATGAGCAACTATGTCTTCATTTTCTACTCAAACCTTCTCGCTTTCTTCTTCCTTCTCCCAACCACTCTCTTCTATTACAGAAATGCCCCTCCTCCTCTTCCTATCCCAACCTCAATCCTCTCTAGAATCTTCCTCCTTAGTTCTCTCAGTGCTACGGTGCAGACGCTGATGTACACTGGTATTGGATATAGCTCTCCTACGCTGTCCTCTGCAATGATGGATCTAGTCCCTGCTTTCACTTTCATTCTTGCCATTTTCTCCAGGATGGAAAATCTGAATATGAAACGACATAGCAGCTATGCAAAAATTATTGGGACAATAGTGTCCATTGCAGGGGCATTAATCGTCACCTTATATAAAGGGATGCCATTAACTAGTACTAGTGGTTCATTGCCAAATAAAATTGGAACTTATTATCTCTTCGCAGAATCAAACTCAAACTGGATACTCGGTGGTTTTCTTCTTGCAATTGCTAGCTTTTGCCTTTCAATCTTGATTGTTGTTCAGACATGGATTATGAAGGATTATCCTGAAGAACTCGTGGTAACAACCACTGGTTGCGGTTTTGTTGTAGTGCTATCCTCCATAGTAGCTTTGGTTGCAGAGCAAAATAAAAAAACTTGGATACTTAAGCCTGATATCCAATTGTTATGCATATTTTATTCGGCAATTTTTGTGGTATCAACACGAAGCGTGGTGGTAGCATGGGCATGCCGTAAGAAAGGGCCAGTGTATGTAGCAATGTTCAGTCCTCTAGCAATGGTCATTGCTATTGCTATGGGTATAACATTTCTTCATGACACTCTTTTCCTTGGAAGTGTTATTGGAGCTGTTGCAATAGCTATAGGGTTTTATTCTGTGATATGGGCACAGGCTCAAGAGGAAAATATGGAAAACAATAATGAATCTGTTCCATCTTCAACAGCACCTCTGTTGCCCAAGAAAAGCACAGATTGTACATAA 1068 0.4157 MATRVVGVSITAAMISVQFLEVGLNTLVKSATTNGMSNYVFIFYSNLLAFFFLLPTTLFYYRNAPPPLPIPTSILSRIFLLSSLSATVQTLMYTGIGYSSPTLSSAMMDLVPAFTFILAIFSRMENLNMKRHSSYAKIIGTIVSIAGALIVTLYKGMPLTSTSGSLPNKIGTYYLFAESNSNWILGGFLLAIASFCLSILIVVQTWIMKDYPEELVVTTTGCGFVVVLSSIVALVAEQNKKTWILKPDIQLLCIFYSAIFVVSTRSVVVAWACRKKGPVYVAMFSPLAMVIAIAMGITFLHDTLFLGSVIGAVAIAIGFYSVIWAQAQEENMENNNESVPSSTAPLLPKKSTDCT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc161g00009 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Stsc161g00009 355 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Stsc161g00009 355 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Stsc161g00009 355 Pfam EamA-like transporter family 22 152 IPR000620 GO:0016020
Stsc161g00009 355 MobiDBLite consensus disorder prediction 334 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc161g00009 Stsc-Chr161 49841 53492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc161g00009 12 340 Nodulin-like Gene Family AT5G40240 43.114 3.08e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc161g00009 - - gmx:100793168 400.979