Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc161433g00001 ATGATCCAGCTGAAATGTGCTGCCTGTGGTTTTGTGTCGGATGTGGATATGAGGGACAAGCTGACTACATTTATTCTGAAAAACCCTCCCGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCATGAGAAGAGCTGAGAAGGAGAGATTGAAGGAAGGTGAAATGGCCGATGAGGAGCAGAAGAAAATCAAGAAGGAGGTAAAGAAGAAAGTCTCTTCCACTTCCAAGGATGGCACTACAAAGTCAACCACTAAGAAGAAGGCAAGTACCTCAGATGATGACCGTATATCGCCTACTCACAGTCAAGTGGACGAGAAAGAAGATGCTTCTCAGGAAGAAGATGATGATGATGACATCCAATGGCAAACAGATACGTCACTGGAGGCGGCTCGCCAACGCATCCAAGAACAGTTAAGTGCTGTAACAGCTGATATGGTCATGCTCTCCACAAACGAGCCTGAGAAGAATGGAAAAACAACAAGCAAGGCGAGCAA 494 0.4555 MIQLKCAACGFVSDVDMRDKLTTFILKNPPETKKGSKDKKAMRRAEKERLKEGEMADEEQKKIKKEVKKKVSSTSKDGTTKSTTKKKASTSDDDRISPTHSQVDEKEDASQEEDDDDDIQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKNGKTTSKAS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc161433g00001 164 MobiDBLite consensus disorder prediction 144 164 - -
Stsc161433g00001 164 Gene3D - 1 33 - -
Stsc161433g00001 164 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 154 IPR045196 GO:0003743|GO:0006413
Stsc161433g00001 164 MobiDBLite consensus disorder prediction 108 122 - -
Stsc161433g00001 164 FunFam Eukaryotic translation initiation factor 5 1 28 - -
Stsc161433g00001 164 MobiDBLite consensus disorder prediction 23 131 - -
Stsc161433g00001 164 MobiDBLite consensus disorder prediction 31 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc161433g00001 Stsc-Chr161433 1 518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc161433g00001 1 155 Eukaryotic Initiation Factors Gene Family AT1G36730 60.645 8.50e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc161433g00001 K03262 - tcc:18601951 212.231