Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc161420g00001 ATGGATGGAGGAAGAGACTCCGAGATTGCCATGGGAGCTTATCAACCGCACCATTTGGCCACCAACCAAGGTGGTGCGAGGGGCCAAATCCATGGCTTCCGAATGTCCCTATGGTACGAGCACCTCGGCATGCATGAAGACACCTTCCTCAACCCTGAAAATGAAGAATGTATTAACAAAGTGAACGAGCTTGCAAAGAAATATTGGGACTTGTATTCTAATAAAGATTCAGTTGACCTTCCTGGCCACTTGCTTCGGTATCCTATTGATATTTCTGCTGATGGAACCGTCACAAATCTCAAAGGATTTGAGTTCTTCCCAGACACTGATGATGCTCCTATTCTAG 346 0.4595 MDGGRDSEIAMGAYQPHHLATNQGGARGQIHGFRMSLWYEHLGMHEDTFLNPENEECINKVNELAKKYWDLYSNKDSVDLPGHLLRYPIDISADGTVTNLKGFEFFPDTDDAPIL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc161420g00001 115 PANTHER PHOSPHOLIPASE D 1 109 IPR015679 -
Stsc161420g00001 115 Pfam Phospholipase D C terminal 46 110 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc161420g00001 Stsc-Chr161420 10 355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc161420g00001 1 109 Phospholipase D Gene Family (Wang group) AT1G52570 70.000 1.62e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc161420g00001 K01115 - gmx:100786410 175.252