Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc161053g00001 ATGGCGGAAGGTAGCGGAGACAACAAGAAGAGACTTCTCACTATTAGCATCTCCATGGTCCTTCTCGTGGGCGTGATCGGCTCGGTTGCGATCGGCGTAAGCAGCCACCCAACCGGCAAATCCGCCGACTGCGTTGATGACCACGAAGAAGACCCCCACGTGGCAAAATCCCAAAAGAACGTAGAAATGATTTGCGGATCCACAGAATACAAAGACACATGCAAAGACAGTCTCTCAGATGCTTCAAACAAAACCTCAGACATGAAAGAACTCATCAAAGCTGCATTCAACTACACAACAATTGAATTATCCAGCCACATTCAAAACTCATCTCTTTACAAAGAGTTAGGGAAGGACAACATGACGAGACAAGCTTTAAACATATGCAAGGAAGTTCTTGGTTATGCAGTTGATGATCTTCACAAATCTATTGAAAAGATTGACAAATTTGAGCTGAGCAAGATCAATGAATAT 474 0.4367 MAEGSGDNKKRLLTISISMVLLVGVIGSVAIGVSSHPTGKSADCVDDHEEDPHVAKSQKNVEMICGSTEYKDTCKDSLSDASNKTSDMKELIKAAFNYTTIELSSHIQNSSLYKELGKDNMTRQALNICKEVLGYAVDDLHKSIEKIDKFELSKINEY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc161053g00001 158 PANTHER PECTINESTERASE 17 152 - -
Stsc161053g00001 158 Pfam Plant invertase/pectin methylesterase inhibitor 61 149 IPR006501 GO:0004857
Stsc161053g00001 158 CDD PMEI-like_3 64 158 - -
Stsc161053g00001 158 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 158 IPR035513 -
Stsc161053g00001 158 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 156 IPR035513 -
Stsc161053g00001 158 NCBIfam pectinesterase inhibitor domain 54 157 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc161053g00001 Stsc-Chr161053 67 540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc161053g00001 9 157 Carbohydrate Esterase AT3G05610 36.601 1.72e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc161053g00001 K01051 - gmx:100784682 144.436