Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc160838g00001 GGTTACCTCCCTGAGGAGCTTGGCTTGCTCACAGATCTTGCTCTCTTCCACATTAACACAAACAGGTTCTGTGGCACACTTCCCCACAAGTTCGACCGTCTCAAGATCCTCTTCGAGTTGGATCTCAGCAACAACCGCTTCGCCGGAAAGTTCCCTGAGGTCGTTCTCCGCTTGCCCAAGCTCAAGTTTCTAGATCTGAGGTTCAACGAATTCGAAGGCACGGTGCCTCCGCAGCTCTTTGACAAGGATCTGGACGCCATTTTCATAAACCATAACCGTTTCGTCTTCGATTTGCCGGATAATTTCGGGAATTCGCCGGTGTCGGTGATTGTTTTGGCGAACAACAAGTTCCACGGGTGCGTGCCTTCGAGCATCGGGAACATGTCAAGGCTGAACGAGATTATTCTGATGAATAACGGTTTCCGTTCATGTTTTCCGTCGGAGATTGGGTTATTGAAGAATCTGACTGTGTTTGATGTGAGCTTTAACCAGCTGTTGGGGCCGTTGCCGGACGCAATTGGCGGAGCCGTCAGCTTGGAGCAGCTGAATGTGGCACACAACTTGCT 566 0.5071 GYLPEELGLLTDLALFHINTNRFCGTLPHKFDRLKILFELDLSNNRFAGKFPEVVLRLPKLKFLDLRFNEFEGTVPPQLFDKDLDAIFINHNRFVFDLPDNFGNSPVSVIVLANNKFHGCVPSSIGNMSRLNEIILMNNGFRSCFPSEIGLLKNLTVFDVSFNQLLGPLPDAIGGAVSLEQLNVAHNLL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc160838g00001 189 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 189 - -
Stsc160838g00001 189 SUPERFAMILY L domain-like 2 188 - -
Stsc160838g00001 189 Gene3D Ribonuclease Inhibitor 1 189 IPR032675 -
Stsc160838g00001 189 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 4 98 - -
Stsc160838g00001 189 Pfam Leucine rich repeat 16 70 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc160838g00001 Stsc-Chr160838 7 572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc160838g00001 3 76 Leucine-rich Repeat extension Gene Families AT3G24480 29.730 4.44e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc160838g00001 - - gmx:106799218 360.147