Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc15g00034 ATGGATAATGTTTACAATTACAAGCTTATCCAAGAAAATGAAACGGTACTTGGCATAGTTGATGATGATGATGCTGATCTTTATACAAACGCACGTGGTTCTCCAATTTCATTGACTTACTATGGATTTTGCCTAGCAAATGGAAACTACACTGTAAATCTCCACTTTGCAGAGATCGTTTTTACCAATGGCACCACATATAAGAGTCTGGGAAGGCGTGTCTTCGATGTATACATTCAGGGAGAACGTGTTCTAAAGGATTTCAACATTGCAAAAGAAGCAAAAGGAATTGGAAAGGCAATTATTATGAACTTTAGTGCTTATGTGAGTAGCAATGAGTTAGAGATTCGGTTATATTGGGCAGGGAAAGGTACTACTGGTCTTCCATTTCGATCACAATATGGCCCTCTTATCTCAGCAATTTCTGTCACTTCTGAGCTGAGAAGTTTAGATCAACAAACTGGTCTATTTTCCTTGCATCAAATTAAAGCAGCAACAAATAACTTCAATATCTCAAATAAAATTGGTGAAGGAGGCTTTGGTCCTGTTTATAAGGGTATTTTACGAGATGGCACTATAATAGCAGTGAAACAACTCTCATCTAAATCAAAGCAAGGAAACCGTGAGTTCATCAATGAGATAGCAATGATCTCAGCATTGCAACATCCTTGTCTTGTTAAACTTTATGGATGCTGTGTTGAGGGAGATCAACTATTGTTGGTATACGAATATATGGAAAACAATAGCCTTTCATATGCATTATTCGGCCCAAAAGCACATCAAATAAAATTGAATTGGCCAACGAGACACAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCGTTTCTTCACGAGGAATCAAGATTGAAAATTGTTCACAGGGACATTAAGGCAACTAATGTGTTACTCGATAAATATTTGAATCCAAAAATATCCGATTTTGGCTTAGCAAGGCTCCATGAAGAGGACGCGACTCACATTAGTACTCGAATAGCCGGGACATAG 1005 0.3781 MDNVYNYKLIQENETVLGIVDDDDADLYTNARGSPISLTYYGFCLANGNYTVNLHFAEIVFTNGTTYKSLGRRVFDVYIQGERVLKDFNIAKEAKGIGKAIIMNFSAYVSSNELEIRLYWAGKGTTGLPFRSQYGPLISAISVTSELRSLDQQTGLFSLHQIKAATNNFNISNKIGEGGFGPVYKGILRDGTIIAVKQLSSKSKQGNREFINEIAMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLSYALFGPKAHQIKLNWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKYLNPKISDFGLARLHEEDATHISTRIAGT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc15g00034 334 SUPERFAMILY Protein kinase-like (PK-like) 152 334 IPR011009 -
Stsc15g00034 334 ProSiteProfiles Protein kinase domain profile. 169 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc15g00034 334 Gene3D - 3 142 - -
Stsc15g00034 334 Gene3D Phosphorylase Kinase; domain 1 143 244 - -
Stsc15g00034 334 Pfam Malectin domain 11 141 IPR021720 -
Stsc15g00034 334 SMART serkin_6 169 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc15g00034 334 Gene3D Transferase(Phosphotransferase) domain 1 245 334 - -
Stsc15g00034 334 Pfam Protein tyrosine and serine/threonine kinase 170 326 IPR001245 GO:0004672|GO:0006468
Stsc15g00034 334 FunFam Os07g0541700 protein 245 334 - -
Stsc15g00034 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Stsc15g00034 334 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 139 244 - -
Stsc15g00034 334 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc15g00034 Stsc-Chr15 274017 278157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc15g00034 10 334 Receptor kinase-like Gene Family AT1G53420 60.858 5.66e-150 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc15g00034 PK_Tyr_Ser-Thr 3.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc15g00034 - - qsa:O6P43_001072 486.108