Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc15g00033 ATGGCACCTGAATATGCGATGCATGGCTATTTGACCGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGTTCTAGAAATTGTTAGTGGAAAGGCTAACACCATTCATCGGTCCAAGGAGGAAGTGTTACATCTTCTTGATTGGGCACATTTGTTGAAAGAGAAAGGCATGCTAATGGAGCTAGTTGATCGAAGGTTAGGTTCAGATTTCAATGAAGAGGAAGTAATGGTGATGATCCAAGTAGCTCTCTTATGTACCAATGGGACTCCAAATCTTAGGCCTTCCATGTCTTCAGTTCTAAGCATGCTTGAAGGCGAAACCATTGTTCCAGAATTTGGTTCAGATGAAAGTGAATTAGCGGATGAGATGAAGTTAGAGGCAATGAGACAACATTACTATCAGAAGGAAGAAAATAAAATGAATGAGGAGGCGAAAAGTGTGTCACATAATAATAATGATGTTGTTGATGATCAATGGACTGCTTCATCTTCCTCTGACCTCTATCCTATGCACATTGATTCTTCATATTATTATTGGGAGCAAAGAAACTAG 552 0.3895 MAPEYAMHGYLTDKADVYSFGIVVLEIVSGKANTIHRSKEEVLHLLDWAHLLKEKGMLMELVDRRLGSDFNEEEVMVMIQVALLCTNGTPNLRPSMSSVLSMLEGETIVPEFGSDESELADEMKLEAMRQHYYQKEENKMNEEAKSVSHNNNDVVDDQWTASSSSDLYPMHIDSSYYYWEQRN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc15g00033 183 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 138 - -
Stsc15g00033 183 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Stsc15g00033 183 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc15g00033 183 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
Stsc15g00033 183 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc15g00033 Stsc-Chr15 273042 273909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc15g00033 1 136 Receptor kinase-like Gene Family AT1G07650 58.824 3.76e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc15g00033 PK_Tyr_Ser-Thr 9.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc15g00033 - - ahf:112772200 319.316