Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc15g00012 | ATGAAACTCAAAACTCTATTCTTCTTCTTCTTCTTCTGTCTCTTTCTTCTCATTGCAACCTCATTTGTTTCTGCAGCCACTCTACAACAACAGGAAGTGGAAGTTCTGAAGGAGATAGGGAAGAGACTTGGGAAGAAGGATTGGGACTTCAGCATAGATCCATGCAGTGGAGAAGGAAACTGGGCTTCCCCTTCTGCTTCTAAATCTTACTCTGCAATAAATGCTGTAACTTGTAACTGTTCTTTCTCTAATAACAATCTCTGCCATGTTGTTAGCATAGTTCTAAAATCACAAAACCTTTCTGGCACTCTTCCTCCTGAGTTTGCAAAGTTGCCTTACCTGCAAGAAATTGATCTCACTCTCAACTACCTTAATGGCACAATCCCAAAGCAATGGAGTTCCTTGAGTCTTGTCAACATTTCCCTTTATGGAAATCGAATATCGGGTCAAATTCCAAAGGAGCTGGGAAACATAACCTCCCTGAAAAGTTTGGTCTTGGAGTTCAATCAACTCTCTGGAGAGCTTCCTCCTGAGCTTGGGAATCTTTTGCAGCTTGAAAGATTGCATCTTACCTCGAACTTTTTTACTGGGAATTTACCTGCTACATTTGCTAGGCTCAGTAAATTGAATTACATTCGGCTTGGCGATAATCAATTTTCCGGAACAATACCGAATTTTATTCAGAGCTGGACAAGTCTTCAGAGACTGGTGATGCATGGGAGTGGTATGAGTGGACCAATTCCTTCTGGAATTTCATTTCTGAAAAACCTTACTGACTTGAGAATCAGTGACTTGAAAGGACCAGATTCTTATTTTCCACCACTTAGTAACTTGACAAATTTGCAAACACTGGTACTGAGAAGTTGCAATCTTATAGGACCGGTTCCTGAATATCTCGGAAATGTAACTACTTTAAGATCATTAGACCTCAGTTTTAACAAATTAAGTGGAGTTATCCCAAACTCATTCGGTGGCCTAATGGACATGAATATACTGTACTTAACTGGAAACTTTTTCACTGGACCACTGCCCAATTGGATTGCTAATCCAGATTACACGGATCTTTCGTATAACAACTTCAGCATCGAAAAGCCAGAGCAGTTGACATGTCAACAAGGAAGTGTAAACCTATTTGCATCATCTTTGAAGGGAAACTACTCGGGAACTTATCCATGTTTGGGGATCACCAACTGTCCTAAACCTTCATACTCTCTCCATATAAATTGTGGAGGGAAGCTCATAACTTATAATGGAAACATCACATATGATGAAGATTCACAAGAAGCTGGACCAGCGAGATCTCTTCGTAGCGGATCAAACTGGGCAGTTAGCAACACTGGTCACTTCTTTGATAGTGGTGTTGTGGACTATTATACATGGTCTAACTCTAACATGTCTAATAAGCTTGCTATGAACAATGCCGAACTGTACACGGATGCACGCGTTTCGGCTCTTTCTCTGACATATTATGCATTCTGCTTGGGAAATGGAAGCTACACTGTGAATCTCCATTTTGCTGAGATAATGTTTACTGATGATCAAACATATAGTAGCCTCGGAAGGCGTGTATTCGACATATATATTCAGAGGAAGTTGTTGCTGAAGGATTTTGATATTGCAAAAGAAGCAGGAGGAGTTGGTAAGGCAATCATAAAGAATTTTACTGCAAATGTGACCGGTGGAACCTTGGAGATCCGGTTACAATGGGCCGGGAAAGGGACAACTGGTATTCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTCAATCCAAACTTTACACCCCCATTGGAAAAAGAAAGTAGCAAAAAAGGAAGTGGCATTCCGGTGGGGGCTATCGTCGGAATTGTATTGGCTGGAGCACTTGTTATTATCATGGTATTTGGTATAGCTTGGTGGAAAGGATGTTTAGGACAAAAAGGTTCATTACATAGAGAGCTACAGGGTTTGGATCTTAAAACCGGCATATTTACCTTAAGGCAAATCAAAGCAGCAACAAACAACTTTGATTTCGCCTGTAAGATTGGAGAAGGAGGGTTTGGTCCAGTATATAAGGGTATTCTTCCAGATGGGACAGTAATAGCAGTTAAACAGCTTTCTTCTCGATCAAGGCAAGGGAATCGCGAGTTCACAAACGAGATCGGCATGATTTCTGCTTTGCAACACCCATGTCTGGTTAAGCTCTATGGGTGTTGTATGGAGGGAGATCAATTGTTGTTGATATATGAATATATGGAAAACAATAGCCTTGCCAGTGCTTTGTTTGCCAAAGAGAAAACTCAGTTGAAATTGGACTGGTCAACACGGCGCAAGATTTGTATAGGCATTGCTAAAGGCTTGGCTTACCTCCATGGAGAGTCTAGATTAAAAATAGTTCATAGGGACATCAAGGCTACTAATGTGTTGCTGGATAAAGATCTAAACCCAAAGATATCTGATTTCGGTTTGGCCAAGCTTCATGATGAGGGTCAAACACACATAAGCACTAGAGTGGCCGGCACTTATGGATATATGGCACCTGAATATGCAATGCATGGTTATCTGACGGACAAAGCAGATGTTTATAGTTTCGGAGTTGTTGCCTTGGAAATAGTCAGTGGCAAAAGCAATGCCATGAGCTGGCAAAGGGAAGAATGCTTCTCTCTTCTTGATTGGGCTCTTCTCTTAAAAGAGAAAGGTGATCTAATGGACCTAGTTGATGAGAGGTTGAGTTCACACTTCAAAAAAGATGAAGCAATGCTCATCATCAATGTGGCTCTTCTCTGCACAAATGCCTCTCCATTGCACAGGCCAACCATGTCTTCGGTCGTAAGCATGCTCGAAGGCAAAACCTCTGTACAAGAAGTGGTGCCGGACACGACGCAGGTATTCGGCGAGAACAAGTTAGAAATGATCAGAGACTATTACCAACAACAGAAGAAGGGGAAAGATAAGATTCCAGACACTGAAGAAGTAAGCACCTCAACAAATGAAACTGCTGCATTTGTGACTAATTCAGATGTCAATTCAATGAGCATGGATTCTTCTTATTGGGAGGAAAAAAGTGGTAGATGA | 3063 | 0.4127 | MKLKTLFFFFFFCLFLLIATSFVSAATLQQQEVEVLKEIGKRLGKKDWDFSIDPCSGEGNWASPSASKSYSAINAVTCNCSFSNNNLCHVVSIVLKSQNLSGTLPPEFAKLPYLQEIDLTLNYLNGTIPKQWSSLSLVNISLYGNRISGQIPKELGNITSLKSLVLEFNQLSGELPPELGNLLQLERLHLTSNFFTGNLPATFARLSKLNYIRLGDNQFSGTIPNFIQSWTSLQRLVMHGSGMSGPIPSGISFLKNLTDLRISDLKGPDSYFPPLSNLTNLQTLVLRSCNLIGPVPEYLGNVTTLRSLDLSFNKLSGVIPNSFGGLMDMNILYLTGNFFTGPLPNWIANPDYTDLSYNNFSIEKPEQLTCQQGSVNLFASSLKGNYSGTYPCLGITNCPKPSYSLHINCGGKLITYNGNITYDEDSQEAGPARSLRSGSNWAVSNTGHFFDSGVVDYYTWSNSNMSNKLAMNNAELYTDARVSALSLTYYAFCLGNGSYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQRKLLLKDFDIAKEAGGVGKAIIKNFTANVTGGTLEIRLQWAGKGTTGIPFGSVYGPLISAISVNPNFTPPLEKESSKKGSGIPVGAIVGIVLAGALVIIMVFGIAWWKGCLGQKGSLHRELQGLDLKTGIFTLRQIKAATNNFDFACKIGEGGFGPVYKGILPDGTVIAVKQLSSRSRQGNREFTNEIGMISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLASALFAKEKTQLKLDWSTRRKICIGIAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLHDEGQTHISTRVAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGKSNAMSWQREECFSLLDWALLLKEKGDLMDLVDERLSSHFKKDEAMLIINVALLCTNASPLHRPTMSSVVSMLEGKTSVQEVVPDTTQVFGENKLEMIRDYYQQQKKGKDKIPDTEEVSTSTNETAAFVTNSDVNSMSMDSSYWEEKSGR | 1020 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc15g00012 | 1020 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At1g53420 | 29 | 266 | - | - | |
Stsc15g00012 | 1020 | SUPERFAMILY | L domain-like | 85 | 361 | - | - | |
Stsc15g00012 | 1020 | Gene3D | Ribonuclease Inhibitor | 45 | 200 | IPR032675 | - | |
Stsc15g00012 | 1020 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 402 | 595 | - | - | |
Stsc15g00012 | 1020 | Gene3D | Transferase(Phosphotransferase) domain 1 | 748 | 958 | - | - | |
Stsc15g00012 | 1020 | Pfam | Protein tyrosine and serine/threonine kinase | 674 | 943 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc15g00012 | 1020 | Pfam | Malectin domain | 404 | 590 | IPR021720 | - | |
Stsc15g00012 | 1020 | SMART | serkin_6 | 672 | 943 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc15g00012 | 1020 | CDD | STKc_IRAK | 678 | 945 | - | - | |
Stsc15g00012 | 1020 | ProSiteProfiles | Protein kinase domain profile. | 672 | 953 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc15g00012 | 1020 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 641 | 747 | - | - | |
Stsc15g00012 | 1020 | SUPERFAMILY | Protein kinase-like (PK-like) | 658 | 944 | IPR011009 | - | |
Stsc15g00012 | 1020 | Gene3D | - | 401 | 595 | - | - | |
Stsc15g00012 | 1020 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 11 | 971 | - | - | |
Stsc15g00012 | 1020 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 273 | 368 | - | - | |
Stsc15g00012 | 1020 | Gene3D | Phosphorylase Kinase; domain 1 | 642 | 747 | - | - | |
Stsc15g00012 | 1020 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 748 | 955 | - | - | |
Stsc15g00012 | 1020 | Gene3D | Ribonuclease Inhibitor | 269 | 387 | IPR032675 | - | |
Stsc15g00012 | 1020 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 794 | 806 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc15g00012 | 1020 | Pfam | Leucine rich repeat | 279 | 337 | IPR001611 | GO:0005515 | |
Stsc15g00012 | 1020 | Gene3D | Ribonuclease Inhibitor | 201 | 268 | IPR032675 | - | |
Stsc15g00012 | 1020 | MobiDBLite | consensus disorder prediction | 976 | 995 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc15g00012 | Stsc-Chr15 | 82444 | 89800 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc15g00012 | 22 | 973 | Receptor kinase-like Gene Family | AT1G53420 | 53.486 | 0.0 | 988 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc15g00012 | PK_Tyr_Ser-Thr | 2.1e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc15g00012 | - | - | gmx:100786496 | 1501.88 |