Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc159141g00001 ACCCTTTCTCTTCCAACATCAAAACCACACTCTTTGTGGAACCATCCATGGGTTCATGCGAAATTCAGCTCCACAGCCACCGCCACCACTTGTTCAAGATCAAAAGGTAACTCCTTTACTGCCTCATACCTCATTGAAACTTGTGGGTTCTCACCACAACGAGCCCTTTCGGTTTCCAAGCACCTGAATTTTAAAACTAACGAAAAACCAGAGTTGCCAAAGATTGATTATTTCAAGTCCAAGGGAGTTTCAGACCCTGACATACGCCTCATCATGATGAGTTGGCCTTCAATCCTCCTAAGAAGCTTGGAGAACGAAATCATTCCCTCCTTTGATTTCTTATGCAGCATGCTTCAGTCCAACCAAAATCTCACAAAAGTTCTTATTCGCCATGCTGGTGTTCTCTATGGCTTTGGCAAATGTTTACAACCTAAATTTTTGGTGAACAAGTTGGGTTGTACACCATGTGTCATTTCTAG 479 0.428 TLSLPTSKPHSLWNHPWVHAKFSSTATATTCSRSKGNSFTASYLIETCGFSPQRALSVSKHLNFKTNEKPELPKIDYFKSKGVSDPDIRLIMMSWPSILLRSLENEIIPSFDFLCSMLQSNQNLTKVLIRHAGVLYGFGKCLQPKFLVNKLGCTPCVIS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc159141g00001 159 Gene3D Transcription termination factor 3, mitochondrial 17 159 IPR038538 -
Stsc159141g00001 159 PANTHER CGI-12 PROTEIN-RELATED 35 147 IPR003690 GO:0003690|GO:0006355
Stsc159141g00001 159 Pfam mTERF 62 134 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc159141g00001 Stsc-Chr159141 87 671 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc159141g00001 mTERF 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc159141g00001 K15031 - aew:130763860 93.2041