Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc159098g00001 TTTACAGTCCAAAGGCAACAACCGGAGCTAGTGGCTCCGGCTACACCAACTCCCCACGAAGTTAAACCATTATCTGACATAGATGATCAAGAGGGGTTCCGTTTCCATATTCCACTCTTTTATGTTTATCAGCACAAGCCATCTATGGAAGGAAAAGATCCAGTTAAGGTTATAAGAGATGCACTCTCGAGAACACTTGTGTTTTATTATCCATTTGCCGGCAGGATTAGGGAGTGTCATGGCCGCAAGTTGGTGGTGGATTGCACCGGGGAAGGTGCCTTGTTTATTGAAGCAGATGCTGGCGTAACGCTTGATCAACTTCGTGGCTCTCTTCAACCTCCATTCCCATGTTCCCAAGAACTCCTTTATAATGTTCCAGGCTCGGATGGAATTATCAACTGCCCCCTTCTACTCATACAG 420 0.4619 FTVQRQQPELVAPATPTPHEVKPLSDIDDQEGFRFHIPLFYVYQHKPSMEGKDPVKVIRDALSRTLVFYYPFAGRIRECHGRKLVVDCTGEGALFIEADAGVTLDQLRGSLQPPFPCSQELLYNVPGSDGIINCPLLLIQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc159098g00001 140 MobiDBLite consensus disorder prediction 1 21 - -
Stsc159098g00001 140 Pfam Transferase family 3 140 - -
Stsc159098g00001 140 PANTHER ACYL TRANSFERASE 4 1 115 - -
Stsc159098g00001 140 Gene3D - 2 140 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc159098g00001 Stsc-Chr159098 165 586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc159098g00001 3 140 Monolignol Biosynthesis Gene Families AT5G48930 34.783 5.31e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc159098g00001 K19861 - gmx:100787907 219.164