Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc157751g00001 ATGTCATGGAGACTTCCATCCACATCTCTGTTTGAACCATCTGAAATATGTGGCAGAAAAGAAGACAAGGAGGCCATATTGAAACTCTTGTTGGATGATGATGATGATGCTGATTTATCTGTGATTCCCATTGTTGGTTTGGGTGGGATAGGAAAGACCACTTTGGCTCAAATGGTTTACCACGATGACAAAGTGAAGGAGATGTTTGATTTTCGAGGTTGGGTTTGTGTGTCAGAAGAGTTTGATGTTGTCAAGGTCACCAAGACTATAATCGAGGCGATAACTTCGAGTCCTTGTAACTTGACAGATTTGAATTTACTTCAACAAGATTTAAAGGAAAAGTTGTCGAGGCAAAAGTTCTTTGTTGTCTTGGACGATGTCTGGAATCAAAATTATGATGATTGGAATAAACTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTATCATAACTACTAGAAGTAAAAATGTGGCTTCTGTAGTCCAAACTGTGTCACCTCATGAACTAACCTCATTATCTGATGAAGATTGTTGGTTGGTGTTTACAAAACATGCACTTCTTTCAACTGTTTTTGTGGAGAATCCAACTCTGGAAAAAATCGGCAGAGATATCGTAAAGAAGTGTTGTGGATTGCCCTTGGCAGCTCAAGCTCTTGGAGGCTTATTGCGCGGAAACTCTGATGTCAAGTATTGGAATCATGTGCTGAAGAGTGAGATCTGGGAACTCTCCGATGATAGAATAAATATTGTTCCAGCATTGAGAATAA 775 0.3897 MSWRLPSTSLFEPSEICGRKEDKEAILKLLLDDDDDADLSVIPIVGLGGIGKTTLAQMVYHDDKVKEMFDFRGWVCVSEEFDVVKVTKTIIEAITSSPCNLTDLNLLQQDLKEKLSRQKFFVVLDDVWNQNYDDWNKLLKPFQKGVKGSKIIITTRSKNVASVVQTVSPHELTSLSDEDCWLVFTKHALLSTVFVENPTLEKIGRDIVKKCCGLPLAAQALGGLLRGNSDVKYWNHVLKSEIWELSDDRINIVPALRI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc157751g00001 258 PANTHER DISEASE RESISTANCE PROTEIN RP 21 257 IPR044974 GO:0006952
Stsc157751g00001 258 Gene3D - 174 253 IPR042197 -
Stsc157751g00001 258 Gene3D - 4 168 IPR027417 -
Stsc157751g00001 258 PRINTS Disease resistance protein signature 211 225 - -
Stsc157751g00001 258 PRINTS Disease resistance protein signature 114 128 - -
Stsc157751g00001 258 PRINTS Disease resistance protein signature 41 56 - -
Stsc157751g00001 258 Pfam NB-ARC domain 20 239 IPR002182 GO:0043531
Stsc157751g00001 258 FunFam Probable disease resistance protein At1g61300 5 168 - -
Stsc157751g00001 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc157751g00001 Stsc-Chr157751 132 906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc157751g00001 38 227 WRKY Transcription Factor Family AT5G45050 25.641 4.22e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc157751g00001 - - ahf:112728729 412.535