Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc156g00013 ATGTTACGCTTATGCTATACCCCTTTCGATTGCTGTTTCCGGCGACGAGGCGGCGGCGCCGACAGCCTTCTCTGGCACACTGATCTCAAGCCTCACTTCTCCGGTGACTTCTCCATCGCCGTCGCCCAGGCCAATAACAACCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACCTACATCGGCGTCTACGACGGCCACGGCGGCCCCGAGGCTTCCCGATTCGTCAACAAGCGTCTCTTACCCTATTTGCACAAGTTCGCCTCTGAACAAGGGGGATTGTCAGTGGATGTCATAAAGAAGGCGTTCAGTGCAACTGAGGAGGAGTTCTTGCATTTGGTCAAGCTGTCTTTACCAGTTAGTCCCCAGATTGCTTCAGTGGGATCGTGCTGCCTCCTTGGCGCAATTTCTAAGAATGTCTTGTATGTTGCTAACCTCGGAGACTCTAGAGCTGTTCTTGGCCGCAGGGATGCAGATAGAAAGAATTCTCCGGTGGTGGCACTGCGGTTGTCCACCGATCATAATGTAGCTGATGAAGAGGTGAGGCGAGAAGTTGAAGCCCTCCACCCTGATGATTCACATATTGTGGTCTATACTCGTGGAGTTTGGAGAATTAAGGGCATTATACAGGTACAGTTACAACTATACAAGCTTTATTTGTTTATCAATTCTGTGCATGGTTTTAAGATATATTCTGTGTATGGAATTATGGATAGATATTCTGTTTATATTTACATACTGTGGTACAAACATATATCACAGTGA 771 0.4838 MLRLCYTPFDCCFRRRGGGADSLLWHTDLKPHFSGDFSIAVAQANNNLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFASEQGGLSVDVIKKAFSATEEEFLHLVKLSLPVSPQIASVGSCCLLGAISKNVLYVANLGDSRAVLGRRDADRKNSPVVALRLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVQLQLYKLYLFINSVHGFKIYSVYGIMDRYSVYIYILWYKHISQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc156g00013 256 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Stsc156g00013 256 ProSiteProfiles PPM-type phosphatase domain profile. 36 256 IPR001932 -
Stsc156g00013 256 CDD PP2Cc 41 213 IPR001932 -
Stsc156g00013 256 Gene3D - 30 222 IPR036457 -
Stsc156g00013 256 SUPERFAMILY PP2C-like 43 196 IPR036457 -
Stsc156g00013 256 SMART PP2C_4 30 248 IPR001932 -
Stsc156g00013 256 PANTHER PROTEIN PHOSPHATASE 35 215 IPR015655 GO:0004722|GO:0006470
Stsc156g00013 256 Pfam Protein phosphatase 2C 57 212 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc156g00013 Stsc-Chr156 53688 55961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc156g00013 18 242 PP2C-type Phosphatase Gene Family AT3G51370 51.931 5.04e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc156g00013 K01102 - gmx:100813810 389.037