Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc156g00012 ATGTTACGCTTATGCTATACCCCTTTCGATTGCTGTTTCCGGCGACGAGGCGGCGGCGCCGACAGCCTTCTCTGGCACACTGATCTCAAGCCTCACTTCTCCGGTGACTTCTCCATCGCCGTCGCCCAGGCCAATAACAACCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACCTACATCGGCGTCTACGACGGCCACGGCGGCCCCGAGGCTTCCCGATTCGTCAACAAGCGTCTCTTACCCTATTTGCACAAGTTCGCCTCTGAACAAGGGGGATTGTCAGTGGATGTCATAAAGAAGGCGTTCAGTGCAACTGAGGAGGAGTTCTTGCATTTGGTCAAGCTGTCTTTACCAGTTAGTCCCCAGATTGCTTCAGTGGGATCGTGCTGCCTCCTTGGCGCAATTTCTAAGAATGTCTTGTATGTTGCTAACCTCGGAGACTCTAGAGCTGTTCTTGGCCGCAGGGATGCAGATAGAAAGAATTCTCCGGTGGTGGCACTGCGGTTGTCCACCGATCATAATGTAGCTGATGAAGAGGTGAGGCGAGAAGTTGAAGCCCTCCACCCTGATGATTCACATATTGTGGTCTATACTCGTGGAGTTTGGAGAATTAAGGGCATTATACAGGTGTCAAGATCAATTGGTGATGTTTACTTAAAGAGACCTGATTTCTACAGAGACCCAATTTTTCAGCAATTTGCAAATCCTATTCCCTTGAAGCGACCTGTAATGACGGCTGAACCATCAGTCATAATTAGGGAACTTGAAACGGAAGATCTGTTTTTGATATTCGCATCAGATGGATTATGGGAACAATTAAGTGATGAAGAAGCAGTAGAGATTGTTTTCAAATATCCAAGAGCTGTGAGTGTCTTCTGTAACTCTTGA 897 0.4838 MLRLCYTPFDCCFRRRGGGADSLLWHTDLKPHFSGDFSIAVAQANNNLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFASEQGGLSVDVIKKAFSATEEEFLHLVKLSLPVSPQIASVGSCCLLGAISKNVLYVANLGDSRAVLGRRDADRKNSPVVALRLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFQQFANPIPLKRPVMTAEPSVIIRELETEDLFLIFASDGLWEQLSDEEAVEIVFKYPRAVSVFCNS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc156g00012 298 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Stsc156g00012 298 SUPERFAMILY PP2C-like 43 287 IPR036457 -
Stsc156g00012 298 CDD PP2Cc 41 294 IPR001932 -
Stsc156g00012 298 PANTHER PROTEIN PHOSPHATASE 35 289 IPR015655 GO:0004722|GO:0006470
Stsc156g00012 298 ProSiteProfiles PPM-type phosphatase domain profile. 36 298 IPR001932 -
Stsc156g00012 298 Gene3D - 30 294 IPR036457 -
Stsc156g00012 298 FunFam Probable protein phosphatase 2C 42 27 294 - -
Stsc156g00012 298 SMART PP2C_4 30 297 IPR001932 -
Stsc156g00012 298 Pfam Protein phosphatase 2C 57 285 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc156g00012 Stsc-Chr156 53688 55961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc156g00012 18 290 PP2C-type Phosphatase Gene Family AT3G51370 55.516 3.16e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc156g00012 - K01102 gmx:100813810 520.776