Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc156g00011 ATGTTACGCTTATGCTATACCCCTTTCGATTGCTGTTTCCGGCGACGAGGCGGCGGCGCCGACAGCCTTCTCTGGCACACTGATCTCAAGCCTCACTTCTCCGGTGACTTCTCCATCGCCGTCGCCCAGGCCAATAACAACCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACCTACATCGGCGTCTACGACGGCCACGGCGGCCCCGAGGCTTCCCGATTCGTCAACAAGCGTCTCTTACCCTATTTGCACAAGTTCGCCTCTGAACAAGGGGGATTGTCAGTGGATGTCATAAAGAAGGCGTTCAGTGCAACTGAGGAGGAGTTCTTGCATTTGGTCAAGCTGTCTTTACCAGTTAGTCCCCAGATTGCTTCAGTGGGATCGTGCTGCCTCCTTGGCGCAATTTCTAAGAATGTCTTGTATGTTGCTAACCTCGGAGACTCTAGAGCTGTTCTTGGCCGCAGGGATGCAGATAGAAAGAATTCTCCGGTGGTGGCACTGCGGTTGTCCACCGATCATAATGTAGCTGATGAAGAGGTGAGGCGAGAAGTTGAAGCCCTCCACCCTGATGATTCACATATTGTGGTCTATACTCGTGGAGTTTGGAGAATTAAGGGCATTATACAGGTGTCAAGATCAATTGGTGATGTTTACTTAAAGAGACCTGATTTCTACAGAGACCCAATTTTTCAGCAATTTGCAAATCCTATTCCCTTGAAGCGACCTGTAATGACGGCTGAACCATCAGTCATAATTAGGGAACTTGAAACGGAAGATCTGTTTTTGATATTCGCATCAGATGGATTATGGGAACAATTAAGTGATGAAGAAGCAGTAGAGATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCTGCAATTCAGGAAGCCGCAAAGAAGCGAGAGATGCGATATGATGACATAAAGAAAATTGACAAAGGAATCAGACGACACTTCCATGATGATATAACCGTCATTGTAATCTATCTTGATCACCGTGAGGGCTCCTCCGCTAATGGAAGGTTTAAGCAAAGTGCCGTCGGCTGCACAACTGCCCCCATCGATATTTTTTCCTTAAATGCTGATGAAGCAGAAAAGAGTATGCTTGGTGCGATCGCCTAA 1146 0.4764 MLRLCYTPFDCCFRRRGGGADSLLWHTDLKPHFSGDFSIAVAQANNNLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFASEQGGLSVDVIKKAFSATEEEFLHLVKLSLPVSPQIASVGSCCLLGAISKNVLYVANLGDSRAVLGRRDADRKNSPVVALRLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFQQFANPIPLKRPVMTAEPSVIIRELETEDLFLIFASDGLWEQLSDEEAVEIVFKYPRAGIAKRLVRAAIQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHREGSSANGRFKQSAVGCTTAPIDIFSLNADEAEKSMLGAIA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc156g00011 381 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Stsc156g00011 381 PANTHER PROTEIN PHOSPHATASE 35 337 IPR015655 GO:0004722|GO:0006470
Stsc156g00011 381 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
Stsc156g00011 381 FunFam Probable protein phosphatase 2C 42 27 346 - -
Stsc156g00011 381 Pfam Protein phosphatase 2C 57 307 IPR001932 -
Stsc156g00011 381 SUPERFAMILY PP2C-like 43 340 IPR036457 -
Stsc156g00011 381 CDD PP2Cc 41 338 IPR001932 -
Stsc156g00011 381 Gene3D - 30 346 IPR036457 -
Stsc156g00011 381 SMART PP2C_SIG_2 39 338 IPR001932 -
Stsc156g00011 381 SMART PP2C_4 30 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc156g00011 Stsc-Chr156 53688 55961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc156g00011 18 348 PP2C-type Phosphatase Gene Family AT3G51370 57.522 1.58e-145 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc156g00011 - K01102 gmx:100812137 667.537