Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc156390g00002 ATGGCTATAGATAAGCCAAAGTCTGGTCCTTTATCTATGGACTTGGAGGCTGACTGCAAAAATGTGTGTGTGAGTACCTGTGCTGAAAACAGCCATGGAAGTTCACTTTGTCCACTTCTTGAAGTTCGGCGGACATATAAAAACAATGAGTTTAGATTGAAAGGGACCAAAAATGATGATATCTCGGTGTCACTAATCTTGCGTATTGCTGATCTTGTGGTGATTATATGCTCTTTCCGTCAGGTAAGGAATATACATTTCCTCTTCTACCTTGAGACAGATACTGCAGTTTCTGTGGCATCAGAGATGGTTGAAAATTTGGAGCTATCAGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTATTACCTCAGTGTAAGCCCTCAAATGAAGGATATAGTCATAGTCATTTTCCTGTGCTAAGCAGTCCTCGCTCTGGTATAGGATCCCCTAGCAACATAGTCATTTGCCCCTAG 495 0.4101 MAIDKPKSGPLSMDLEADCKNVCVSTCAENSHGSSLCPLLEVRRTYKNNEFRLKGTKNDDISVSLILRIADLVVIICSFRQVRNIHFLFYLETDTAVSVASEMVENLELSDHDVAFIAELIDYLIMKLLPQCKPSNEGYSHSHFPVLSSPRSGIGSPSNIVICP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc156390g00002 164 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 47 140 - -
Stsc156390g00002 164 Gene3D - 40 132 - -
Stsc156390g00002 164 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 64 125 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc156390g00002 Stsc-Chr156390 911 1588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc156390g00002 8 133 MAP Kinase Kinase Kinase AT3G18750 52.381 5.37e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc156390g00002 K08867 - qsa:O6P43_027404 179.489