Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc156089g00001 ATGGTTGAGGAATTGCTTTCGCCTAAAAGGCATCAATGGATGCAGGACAAAAGGGTGGAAGAATCTGACAACCTTGTCCGTTATGTGTATAACCAAATCAAGAATGGTAGTGGCCTTGTGGATTTGAGGCGAGTAACGAAACACTATGTTGGAAACGTGATGAGGAGGTTGCTCTTCAATAAGAGGTACTTTGGTAATGGTAGTGAAGATTGTGGTCCTGGTGCTGAGGAATTGGAGTATGTTGATGCACTCTTCCTTGTGGTAGGGCACCTTTTCGCATTTCCAATTTCTGATTATCTTCCATGGTTGTGGTGGCTTGATTTGGAAGGTCATAACAAAATATTAAAGGAAGCTACTAACACCATAAGGAAGTACCATGATCCCATCATTGAAGAAAGGATTCATCAGTGGAAGCATGGGACAAGGACACATGAAGAAGATTGGCTTGATATTCTCATCTCACTGAAAGATGCTAATAAAAATCCACTTTTGACCATGGAGGAAATCAAAAGCCTGATTCTGGAAATTGCTATTGGAACATTGGATAATCCATATAATAATGTTGAATGGGTACTTTCTGAAATACTAAATCAACAAGAGATACTTCAAAAAGCTACTGAAGAATTGGACAATATATTAGGAAGGGAGAGATTACTCCAAGAATCTGAAATTTCAAAACTCAAATATGCGATGGCATGTTTAAGAGAAGGTTTTCGCCTTCACCCAATTATAGACTTCAATGCTCCTCATGTCTCAATGAAAGACACCATTGTTGCTGATTACTTCATTCCAAAGGGTAGCCATATTCTTATTAGAAGACAAGGTATTGGCCATAACCCTAGAGTTTGGGAAGAACCATTGAAATTCAAACCAGAAAGGCATTTGTCTAAAAATAATGGATGTGATTTGACTTTGGCTGAGCAAAATTTTGAGTTGTTCACATTCGGTGCTGGAAGAAGAGGTTGCCCTGCAATCACACTTGGAACTACAGTTATTGTTATGCTGTTTGCAAGGTTGATTCATGGATTCACTTGGATTCCGCCTCCCAATGAACCAATCATTAATCTCTCTGAACTTGAAAGTAACACTATGAAAGCTAAGCCACTAATTGCATTGGGAAAGCCAAGATTACCTGCCAAACTTTATCATCAATTGGATTAA 1161 0.3876 MVEELLSPKRHQWMQDKRVEESDNLVRYVYNQIKNGSGLVDLRRVTKHYVGNVMRRLLFNKRYFGNGSEDCGPGAEELEYVDALFLVVGHLFAFPISDYLPWLWWLDLEGHNKILKEATNTIRKYHDPIIEERIHQWKHGTRTHEEDWLDILISLKDANKNPLLTMEEIKSLILEIAIGTLDNPYNNVEWVLSEILNQQEILQKATEELDNILGRERLLQESEISKLKYAMACLREGFRLHPIIDFNAPHVSMKDTIVADYFIPKGSHILIRRQGIGHNPRVWEEPLKFKPERHLSKNNGCDLTLAEQNFELFTFGAGRRGCPAITLGTTVIVMLFARLIHGFTWIPPPNEPIINLSELESNTMKAKPLIALGKPRLPAKLYHQLD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc156089g00001 386 Pfam Cytochrome P450 4 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 PRINTS E-class P450 group I signature 322 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 PRINTS E-class P450 group I signature 231 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 PRINTS E-class P450 group I signature 188 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 PRINTS E-class P450 group I signature 1 6 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 PRINTS E-class P450 group I signature 272 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 PRINTS E-class P450 group I signature 312 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 315 324 IPR017972 GO:0005506|GO:0016705
Stsc156089g00001 386 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 2 383 - -
Stsc156089g00001 386 Gene3D Cytochrome P450 1 371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc156089g00001 386 SUPERFAMILY Cytochrome P450 4 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc156089g00001 Stsc-Chr156089 25 1436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc156089g00001 1 382 Cytochrome P450 AT4G39950 51.175 6.23e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc156089g00001 - - oeu:111394100 464.922