Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155929g00001 ATGACTGCGGGTCCTGAAGCCGAGAATGCAAATGAACAAACACACGAGTTTACGTGTGATGTCGAGGAGGAGTATATTCCGAAGGCTGGAATGACATTTAAAACACTTGGTGAGGTTGGTTTGTTCTACAAAGAGTATGCAAAACGTGCAGGGTTCTCTACTAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATCAATCAACTCATAACATGTAACAGACAAGGACAATGGACATCTGAGGTACCTTACGTTGAGAAGACAAAGCCTATCTGTGGTGCAAATTGTCCCGCATGA 306 0.415 MTAGPEAENANEQTHEFTCDVEEEYIPKAGMTFKTLGEVGLFYKEYAKRAGFSTKIRNTNRCKETKEEINQLITCNRQGQWTSEVPYVEKTKPICGANCPA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155929g00001 101 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 101 - -
Stsc155929g00001 101 Pfam FAR1 DNA-binding domain 42 99 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155929g00001 Stsc-Chr155929 185 679 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc155929g00001 FAR1 1.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155929g00001 - K17604 aip:107614666 97.8265