Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155782g00001 ACTATGCAAGACGTTGGTGAAGAATATTTTGATGAATTAGTAGCGAGATCATTTTTCCAACCTCATGGTACTCGAGAAGAATATTTTGATGAATTAGTAGCGAGATCATTTTTCCAACCTCATGGTACTCGAGAAACGATATTTGTGATGCATGATCTCATGCATGATTTGGCAATGATCTTTGCTGGAGAATTCTGTTCCAGGGCTGAAGAGCATGAGAAGGCTGTTGAGATAGGTATGAAAACTCGTCATTTGTCACATATTGCAAGAAAAGATTATCCAATCTCAAAACTTTTGGAAGTTTGTGACCGAGTAAAACATACCAGGACATTTCTTGAAATCAACTCGAAGACATGGATCCCATTTAACGTGGAAGATGCAGCGTTGTTGTCAGAATTGAAGTACCTCAGAGCTTTGTCTTTCAAGTCAGTTCGTCTTGAGTCACTGCCTGATTCAATAGGCAAGTTGACTCATCTTCGTTATTTGAATCTGTCTGATACCGACATTGTATCATTGCCTGAGTCATTGGGTAGCCTATACAATTTGCAGACCTTGAAGCTATATGGATGTTACCGGTTGGAAATGCTTCCAGATAGCATGCAAGATCTTGTAAATTTGCGTCATCTTGATATTAGACAGACTGGGTTGAATGAGATGCCGAGAGGCATGAGCAAGTTGAAAAGTTTGCAGTTTTTAAGCGACTATGTTGTTGGGAAGGATGAAGGGAACAAGATCAGAGAACTGGGAGCACTTGCAAATCTACAGCAATCAATTTGCATTTCACATTTGGAGAATGTGGTCAACAGTAATGAAGCTTCGGAGGCAAAAGTGTCTGATAAAGATGGCATTGACCTTTTGAAGTTGTATTGGTCTTGGAATGGGGATGAGAATATAGTTGATTTCCAAATTGAAAAAGATATACTGGACAAGTTACAACCTCACAGTAATTTGACAACTCTACAAATTAGTGGTTACAGGGGTACAGCATTTCCAGATTGGTTGGGACATCTTTCATACGACAACATCACCAGCATGACACTGAGTGGTTGCAGGAATTGTCGTGTTCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTTGAAATTTCAAATTTTGAAAGATTGGAGATTGTAGGGGCTGAGTTTTACAGAGATGATGAATCTTGTTTAGAGACTCCATTTCCAATGCTTGAAACTCTTATATTTCATTCAATGCCTTGCTGGAAGGAGTGGCATTCATTGGAGTTCAATACATTTCCTCGACTTAGGGAGCTTAGCATAAGTTGGTGTTCGATGTTGAGAGGAGATTTGCCAAATCATCTACCATCTTTGCAATCACTAAAGATTCAGAGTTGCAGAAAACTAGAATTCCAAATGGATGGCCAACATCACTCGCTGCAGGAATTATCAATAATTGAAAGCTGTGATTCAGTTACATCCTTCTCCTTGTTGGATGCCTTTCCAAATCTCATGCGTGTTCAAATCAGGAAGTGTGAAAAGATGGAATCTATTGTGGTTTCAGGCTCTCTTTCATGTCTCCGTTATTTATATATCTACGATTGTGGGAGTTTGAAATCGGTGTCAATGCTATGGATGGCAGCACCTCAGCTAGAGAAACTCGTATTAGTGGGTTGCACAGAGATGGATTTCTCACCTACAGGGGATCCACCCCGTAGCCTGAGATCTCTTGTAATCAGTTACTCGGACAAACTTGCGAGCAGTGCAACATTGATGAATTCCCAATTTCACTGGCTTACTCAACTTAGTATTCAAAGTGAATTTGGGGGAGCCAGTGTGAAATCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGAAGGTTGGTTGCCTGCCTCACTTGA 1869 0.3975 TMQDVGEEYFDELVARSFFQPHGTREEYFDELVARSFFQPHGTRETIFVMHDLMHDLAMIFAGEFCSRAEEHEKAVEIGMKTRHLSHIARKDYPISKLLEVCDRVKHTRTFLEINSKTWIPFNVEDAALLSELKYLRALSFKSVRLESLPDSIGKLTHLRYLNLSDTDIVSLPESLGSLYNLQTLKLYGCYRLEMLPDSMQDLVNLRHLDIRQTGLNEMPRGMSKLKSLQFLSDYVVGKDEGNKIRELGALANLQQSICISHLENVVNSNEASEAKVSDKDGIDLLKLYWSWNGDENIVDFQIEKDILDKLQPHSNLTTLQISGYRGTAFPDWLGHLSYDNITSMTLSGCRNCRVLPSLGQLPSLKHLEISNFERLEIVGAEFYRDDESCLETPFPMLETLIFHSMPCWKEWHSLEFNTFPRLRELSISWCSMLRGDLPNHLPSLQSLKIQSCRKLEFQMDGQHHSLQELSIIESCDSVTSFSLLDAFPNLMRVQIRKCEKMESIVVSGSLSCLRYLYIYDCGSLKSVSMLWMAAPQLEKLVLVGCTEMDFSPTGDPPRSLRSLVISYSDKLASSATLMNSQFHWLTQLSIQSEFGGASVKSXXXXXXXXXXXKGRLVACLT 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155782g00001 622 Gene3D Ribonuclease Inhibitor 457 593 IPR032675 -
Stsc155782g00001 622 SMART LRR_typ_2 156 179 IPR003591 -
Stsc155782g00001 622 SMART LRR_typ_2 203 226 IPR003591 -
Stsc155782g00001 622 SUPERFAMILY L domain-like 44 533 - -
Stsc155782g00001 622 Gene3D Ribonuclease Inhibitor 94 456 IPR032675 -
Stsc155782g00001 622 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 465 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155782g00001 Stsc-Chr155782 1 2151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc155782g00001 136 232 WRKY Transcription Factor Family AT4G12020 34.694 1.80e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155782g00001 - - ahf:112728729 622.083