Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155755g00001 ATGCAGGTGTCGATGTTGGAAATATACAACGAAACCATCCGTGATCTGTTATCTACAACACGCCAAGAAAATGGTACTCCTGGAAAACAATATACAATTAAACATGATGCAAGTGGAAATACACATGTATCTGATCTCACAGTGGTCGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTATTGAACCAAGCTGCAAATAGCAGGTCGGTGGGAAAGACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTAAAATATATGGTGTAAATGAGAGCACTGAACAACAAGTGCAAGGTGTTCTGAATCTTATTGATCTTGCCGGTAGTGAGCGTCTATCAAAAAGTGGTTCAACCGGGGACAGGTTAAAAGAGACTCAAGCAATCAACAAAAGTTTGTCATCTTTGAGTGATGTAATATTTGCCTTGGCAAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACCTATCTACTTCAG 495 0.398 MQVSMLEIYNETIRDLLSTTRQENGTPGKQYTIKHDASGNTHVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLKIYGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQ 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155755g00001 165 ProSitePatterns Kinesin motor domain signature. 103 114 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc155755g00001 165 Pfam Kinesin motor domain 2 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc155755g00001 165 ProSiteProfiles Kinesin motor domain profile. 1 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc155755g00001 165 PRINTS Kinesin heavy chain signature 104 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc155755g00001 165 PRINTS Kinesin heavy chain signature 153 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc155755g00001 165 PRINTS Kinesin heavy chain signature 73 90 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc155755g00001 165 Gene3D Kinesin motor domain 1 165 IPR036961 -
Stsc155755g00001 165 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 165 IPR027640 GO:0003777|GO:0007018
Stsc155755g00001 165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 165 IPR027417 -
Stsc155755g00001 165 SMART kinesin_4 1 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155755g00001 Stsc-Chr155755 942 2205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc155755g00001 1 164 Calmodulin-binding Proteins AT5G65930 40.361 7.05e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155755g00001 K10405 - gmx:100784221 301.212