Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155657g00001 ATGACTAAAGATGTTGAAGTTGAAGAGCAAAGAGGAGGAGGAGAGTATTCAGCAAAAGACTACCATGAACCTCCACCAGCACCATTTTTTGATGCAGAGGAGCTTACAAAGTGGTCCTTCTATAGAGCACTCATAGCTGAGTTCATAGCAACACTTCTATTCCTTTACATAACTATCTTAACCATAATTGGTTATAGTCACCAAAGTGACACCACAATCAAAGGTAACACTCAGTGTGATGGTGTTGGAATCTTGGGTATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTATTGCACCGCCGGCATTTCTGGAGGACACATCAACCCAGCCGTGACGTTCGGGTTGTTCCTTGGCCGGAAGGTGTCGCTGGTGAGGGCACTGCTGTACATCGTGGCGCAGTGTGCCGGCGCCATTTGCGGCACCGGACTTGCCAAGGGCTTCCAAAAAGCTTACTTTGATAGATATGGAGGTGGTGCCAACTTTGTTCATTCTGGTTACAATAAGGGAACTGCTTTGGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTTACACTGTTTTCTCTGCCACTGATCCTAAGAGAAACGCCAGAGACTCCCATGTTCCAGT 617 0.4652 MTKDVEVEEQRGGGEYSAKDYHEPPPAPFFDAEELTKWSFYRALIAEFIATLLFLYITILTIIGYSHQSDTTIKGNTQCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYIVAQCAGAICGTGLAKGFQKAYFDRYGGGANFVHSGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155657g00001 206 Gene3D Glycerol uptake facilitator protein. 27 206 IPR023271 -
Stsc155657g00001 206 SUPERFAMILY Aquaporin-like 34 202 IPR023271 -
Stsc155657g00001 206 Pfam Major intrinsic protein 34 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc155657g00001 206 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 206 IPR034294 -
Stsc155657g00001 206 MobiDBLite consensus disorder prediction 1 18 - -
Stsc155657g00001 206 MobiDBLite consensus disorder prediction 1 25 - -
Stsc155657g00001 206 ProSitePatterns MIP family signature. 109 117 IPR022357 -
Stsc155657g00001 206 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc155657g00001 206 PRINTS Major intrinsic protein family signature 42 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc155657g00001 206 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc155657g00001 206 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155657g00001 Stsc-Chr155657 886 1897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc155657g00001 1 206 Major Intrinsic Protein MIP AT2G37170 75.728 2.53e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155657g00001 K09872 - gmx:100811119 353.984