Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155551g00002 ATGTCTGTTGATAAGTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCCCAAGAGATGTCGGAGCAACTGCCATTTCATTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCACATGATGACATTCCCGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTGCGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGTACAATTGCTGTTAAGATAAAAAATCTGTCTGCTATGGAAGTGAATATCGTTCGGCCATTCATTGGAAGAGCTTTACAGGCATTTTATAAGCATGATAGTCCGGAGTTGATACCGGACCCGGAAAGAGTTCCTGACAGGCGACCGCAAGTTGTCCAAAATGCCCCAAGGAGGCAACTGCGAAGATAA 405 0.4296 MSVDKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHAHDDIPDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVPDRRPQVVQNAPRRQLRR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155551g00002 134 SUPERFAMILY GINS helical bundle-like 1 105 IPR036224 -
Stsc155551g00002 134 FunFam DNA replication complex GINS protein PSF2 2 115 - -
Stsc155551g00002 134 Pfam GINS complex protein 2 86 IPR021151 -
Stsc155551g00002 134 MobiDBLite consensus disorder prediction 109 134 - -
Stsc155551g00002 134 CDD GINS_A_psf2 1 106 - -
Stsc155551g00002 134 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 127 IPR007257 GO:0005634|GO:0006260
Stsc155551g00002 134 Gene3D - 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155551g00002 Stsc-Chr155551 1 2403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc155551g00002 1 70 Core DNA Replication Machinery Family AT3G12530 74.286 2.48e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155551g00002 K10733 - gmx:100780528 248.44