Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155551g00001 ATGTTATATACTATTTCTCTTACTAAATTAACTAACATCTTTATGAATTTTAGTGCACATGATGACATTCCCGATGCATATATGGTGAGTATAAAAACTGTCCTCCCCTGTAGAAATATGTCTCTGGTTTTCTTTGGATGCTTTACCTTATTATCTTCTGTACAGGTGAGATCTCTAATTGAGGACATCAGAGATGTGCGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGTACAATTGCTGTTAAGATAAAAAATCTGTCTGCTATGGAAGTGAATATCGTTCGGCCATTCATTGGAAGAGCTTTACAGGCATTTTATAAGCATGATAGTCCGGAGTTGATACCGGACCCGGAAAGAGTTCCTGACAGGCGACCGCAAGTTGTCCAAAATGCCCCAAGGAGGCAACTGCGAAGATAA 429 0.3963 MLYTISLTKLTNIFMNFSAHDDIPDAYMVSIKTVLPCRNMSLVFFGCFTLLSSVQVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVPDRRPQVVQNAPRRQLRR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155551g00001 142 Gene3D - 7 117 - -
Stsc155551g00001 142 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 54 135 IPR007257 GO:0005634|GO:0006260
Stsc155551g00001 142 MobiDBLite consensus disorder prediction 119 142 - -
Stsc155551g00001 142 SUPERFAMILY GINS helical bundle-like 53 113 IPR036224 -
Stsc155551g00001 142 CDD GINS_A_psf2 55 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155551g00001 Stsc-Chr155551 1 2403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc155551g00001 19 79 Core DNA Replication Machinery Family AT3G12530 40.984 4.00e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155551g00001 K10733 - gmx:100780528 168.318