Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc155211g00001 ATGGTGAAGTTCACAGCTGAAGAGCTTCGTCGTATTATGGACTACAAACACAACATTCGTAACATGTCTGTGATTGCTCATGTCGATCACGGAAAATCAACTCTAACGGATTCTCTGGTGGCTGCTGCCGGAATTATTGCCCAAGAAGTAGCAGGGGATGTCCGTATGACTGATACCCGGGCAGATGAAGCTGAGCGTGGTATTACAATCAAGTCTACTGGTATCTCTCTCTACTATGAGATGAGTGATGAGGCCCTCAAGAGTTACAAGGGAGAGCGCCAAGGAAATGAGTATCTCATCAATCTCATTGATTCACCTGGGCACGT 326 0.4632 MVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDEALKSYKGERQGNEYLINLIDSPGHV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc155211g00001 109 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Stsc155211g00001 109 Gene3D - 3 109 IPR027417 -
Stsc155211g00001 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 109 IPR027417 -
Stsc155211g00001 109 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Stsc155211g00001 109 PRINTS GTP-binding elongation factor signature 101 109 IPR000795 GO:0003924|GO:0005525
Stsc155211g00001 109 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Stsc155211g00001 109 Pfam Elongation factor Tu GTP binding domain 17 109 IPR000795 GO:0003924|GO:0005525
Stsc155211g00001 109 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 109 IPR000795 GO:0003924|GO:0005525
Stsc155211g00001 109 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc155211g00001 Stsc-Chr155211 6 1426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc155211g00001 1 109 Eukaryotic Initiation Factors Gene Family AT1G56070 93.578 3.60e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc155211g00001 K03234 - aew:130772524 213.386