Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1548g00002 ATGTATGAGCCCCTTCTAAGCCTCTTCTCCAGCAAAGGAGAAGAAGCACATTCACCAAGCACACAAACATCACACAATGAACAATCTCTCCATGATCATGTTCTTGCTGCTCCTTCACTGAGCCAATCCACGTCTCCTTACATAAACCTCATAGCAAACTTGAGCATCAAGAAAAGGAAGACTGCCCATCGCTCACGTTCTGCACCGACCGTACTAGTCACCGACGCTGGTGTAGACTTTGATGAGCCCTCTGAACCTAGATCTATACAAAAGTCATCAACCTTAATAGTAAGGGTATCTTTCATCTCTGTATTCTTGTATTTAGCAATAGGTGTTGCAGTGTACATGATAAATGGGAGTTTTAAGGGTACTACTACACTTATGCCTATAGATGCTATATACTTTACTGTTGTAACTCTATGCACAATTGGATATGGAGATATTGTTCCTGATGCTACATCTACTAAAATCTTTACCTGTGGTTTCGTTTTGATTGGTTTCGGACTTATCGGTTTTCTCCTTAGCGGCTTGGTTGAATACATCTGCGACGCTCAAGAAGCATTCACATTGAGCATGATTGATGGGAATAGATATGAGAGAATTCTTTGGACCTACATAGTTGATGAAGAGAAAGGAAGAATGCGAATTCGGACAAAAGTTTCTTTAGCTTTGGTGGTTGTCATTGGTTGCATCACAATAGGAGCAGTTACAGCTCACTTTCTTTGA 726 0.4091 MYEPLLSLFSSKGEEAHSPSTQTSHNEQSLHDHVLAAPSLSQSTSPYINLIANLSIKKRKTAHRSRSAPTVLVTDAGVDFDEPSEPRSIQKSSTLIVRVSFISVFLYLAIGVAVYMINGSFKGTTTLMPIDAIYFTVVTLCTIGYGDIVPDATSTKIFTCGFVLIGFGLIGFLLSGLVEYICDAQEAFTLSMIDGNRYERILWTYIVDEEKGRMRIRTKVSLALVVVIGCITIGAVTAHFL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1548g00002 241 Gene3D - 85 195 - -
Stsc1548g00002 241 Pfam Ion channel 103 181 IPR013099 -
Stsc1548g00002 241 SUPERFAMILY Voltage-gated potassium channels 93 181 - -
Stsc1548g00002 241 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 131 240 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1548g00002 Stsc-Chr1548 1484 2209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1548g00002 63 241 Ion Channels AT4G18160 41.667 2.81e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1548g00002 K05389 - gmx:100789639 287.73