Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc154250g00001 ATGAATGCCTTTAAGCAAAACTGCACTGTAAAAGCAGAACAGGTTGAGTTGTCCAAGAGGGTTCTCAACTATTGCAAAGGCCTCCCTTTAGCATTAAAAATCTTGGGTTCCTTCCTCAAAGGAAAAACTCAACAAGAGTGGGAAAGTGAATTGGCCAAACTTGAAAGGATGCCTGATCAAAAAATCCAAAGGATATTGCAAGTGAGCTTTAATGAATTGGATCGTAATGATGGGAATATCTTTTTGGATCTTGCATGTTTCTTTGATGCAAGTACAGAAGAAGAGCAGCTAAAATTTATTCTTGATTGCTGTGGATACACAACTACCATCGGGTTGACAAACCTCCGGAATAAAGCTCTTATTTCCATTTCAAATGGTTGTGTTTCAATGCATGACTTAATTCGAGAAATGGGCCGCGAAATTGTTCGTGAAGAATCTCCAAAGAATCCAGAAAAACGCAGTAGACTGTGGGATGCTCGTGATATCTATGAAGTATTGAAAAACAATAAGGGAAGTGAAGTTATTGAAAGCATCACATTAAACATGGCGGAAATTGAGAGCATAAGCTTGCAGCCTGGGACATTTGAAAGAATGCGGGCACTGAAGCTTTTTAGATGTCATTCACCCGAATCCAAAAACAAGTTGCTTGCTCCTCAAGGTATTACATCCATATCAAAGGAGTTAAGGTATTTTCGTTGGGATGAGTATCCTTTGAAATCTTTGTCGCCTTCTTTAATAAGTGTTGAGAAAATTGTTGAAATCATAATGCCCAAGAGTAGATTGAAAAGGCTTTGGGAAGGTGAACAGAATCTCGTAAATCTAAGGAAAGTGGATATTCATGGTTCATCCAGCCTAATGGAGCTCCCAAATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCAGGTTGCGTTAGAGTGCGTCGAGTTCCTCCATCTGCTGTATCATCCCAGAAGCTGAAATATCTCAACGTGAGCCAATGTAGGAGCCTTGAGTCCATAGAAGAGCTTCCACCATCGGTTGTATGCGTAATTGCTATTGACTGCAGCTCACTACACACTGTATCTATATCTGCTTTAGATTCTGTGGCCGAAGAACAGACGATCCAGCAGCAGCAATTTGATGATATAACCTTCAATTTCAGCGACTGCCAAAAATTGGGACAGCATGCAAAAAAGAGCATTACAGAACATGCCTATGGCAGACTAAAGCGACCACTAGCAGCAGCTCCTACATGTAATACAACAACAACATGGAAGCAAGATAAGGGTACATATGAGTATCTTTCTGGGTGGAACATCAAGCATAAACATCCCAAGTTAAGTGTCTCGTTAGTTGGAACCCCAGAACGGTTAGGATATATAACCCCAGAAAAAAGGACCATCACTATTGATGTTTCCCCAGGTGATACCTTGTTGGGTTTCATCTTTTGGGTCCTCGTTAGTACTCCATGGTGCGCGAGTGAAGAAGTTTACGCCACTCGAGGAGTGACATATGACTATTTAGTTAAAGTGAGTGATGGCCCAAGGTTCAGTTATGACGGTTTTCATAGATCATCCGGTAGAGTAGATGATGCTATAAGCTATGTTTGGTACGACGGGCAATGCTGCGCTGACATGATGAAAGTAATGGACGAAAACAGCAACACTAATAATAATAATAATAATACCATTCAACTCGTGGTTTCATTCAATTTTTCGAGCAAACGTGTTCTTGTGCCTGATGATGAAGAATTTCACGACGAAGCATCCGATTGGGGTGTACACCCCGTGTATGCCTCAGATGTTCGAAATGATCACAATTCACAAGCTTCCAATAAACCCCTGCACTTTTCTAAGAAACTTCCAGTCAAGTCATATGAATGCTATTTTTAA 1878 0.4052 MNAFKQNCTVKAEQVELSKRVLNYCKGLPLALKILGSFLKGKTQQEWESELAKLERMPDQKIQRILQVSFNELDRNDGNIFLDLACFFDASTEEEQLKFILDCCGYTTTIGLTNLRNKALISISNGCVSMHDLIREMGREIVREESPKNPEKRSRLWDARDIYEVLKNNKGSEVIESITLNMAEIESISLQPGTFERMRALKLFRCHSPESKNKLLAPQGITSISKELRYFRWDEYPLKSLSPSLISVEKIVEIIMPKSRLKRLWEGEQNLVNLRKVDIHGSSSLMELPNLSKASNLREVSISGCVRVRRVPPSAVSSQKLKYLNVSQCRSLESIEELPPSVVCVIAIDCSSLHTVSISALDSVAEEQTIQQQQFDDITFNFSDCQKLGQHAKKSITEHAYGRLKRPLAAAPTCNTTTTWKQDKGTYEYLSGWNIKHKHPKLSVSLVGTPERLGYITPEKRTITIDVSPGDTLLGFIFWVLVSTPWCASEEVYATRGVTYDYLVKVSDGPRFSYDGFHRSSGRVDDAISYVWYDGQCCADMMKVMDENSNTNNNNNNTIQLVVSFNFSSKRVLVPDDEEFHDEASDWGVHPVYASDVRNDHNSQASNKPLHFSKKLPVKSYECYF 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc154250g00001 625 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 394 IPR044974 GO:0006952
Stsc154250g00001 625 SUPERFAMILY L domain-like 130 340 - -
Stsc154250g00001 625 Gene3D - 1 74 IPR042197 -
Stsc154250g00001 625 Gene3D Ribonuclease Inhibitor 146 369 IPR032675 -
Stsc154250g00001 625 PRINTS Disease resistance protein signature 25 39 - -
Stsc154250g00001 625 PRINTS Disease resistance protein signature 316 332 - -
Stsc154250g00001 625 Pfam NB-ARC domain 5 73 IPR002182 GO:0043531
Stsc154250g00001 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 84 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc154250g00001 Stsc-Chr154250 334 2525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc154250g00001 17 360 WRKY Transcription Factor Family AT4G12020 33.521 3.08e-48 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc154250g00001 - - ahf:112706556 771.541