Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc154015g00001 ATGAATCTCAGCAATGGCAGCGGATCCATGTCGACGGTTACTTCAGGTGCCGCTCTGAAATCCACAGGCGCCATCTCCGACCAGTTTTCGGCGGGTCTCCGGGTCCTTGTTGTGGACGATGATCCCACGTCTCTCATGATTCTCGAGAAGATGCTTCGAATTTGTTGTTACGAATACATGGATGGATTTAAATTGTTAGAGCACATTGGCTTGGAAATGGACCTCCCTATTATCATAATATCTGCAGATGATGATAACAATGTTATTATGAAAGGTGTAATGTACGGGGCCTGTGATTACTTAATTAAACCTGTTCGCATAGAAGTTTTTAAGAACATATGGCAGCACATTGTTCGGAAGAGAATGAATGAATGGAGAGATATTGAGCTGCCAGAGAGCGCTGAAGAAGGAGATCGACAGCAGAAGGTATCGGATGAATGCAACTGGAGGAGCTCAAAGGAGAGGAGGGATGAGGAAGAGGAAGCAAACAAAAGAGATGACACTAAAACTTTGAAGAAGCCAAGAGTTGTTTGGTCTGTTGTGCTCCATCAACGGTTTGTAGCTGTTGTTAATCAACTGGGAATTAATA 589 0.438 MNLSNGSGSMSTVTSGAALKSTGAISDQFSAGLRVLVVDDDPTSLMILEKMLRICCYEYMDGFKLLEHIGLEMDLPIIIISADDDNNVIMKGVMYGACDYLIKPVRIEVFKNIWQHIVRKRMNEWRDIELPESAEEGDRQQKVSDECNWRSSKERRDEEEEANKRDDTKTLKKPRVVWSVVLHQRFVAVVNQLGIN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc154015g00001 196 SUPERFAMILY CheY-like 32 126 IPR011006 -
Stsc154015g00001 196 ProSiteProfiles Response regulatory domain profile. 1 118 IPR001789 GO:0000160
Stsc154015g00001 196 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 58 IPR045279 GO:0009736
Stsc154015g00001 196 Gene3D - 58 125 - -
Stsc154015g00001 196 MobiDBLite consensus disorder prediction 133 168 - -
Stsc154015g00001 196 Gene3D - 170 196 - -
Stsc154015g00001 196 CDD REC_typeB_ARR-like 35 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc154015g00001 Stsc-Chr154015 3138 4128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc154015g00001 1 196 Response Regulator Gene Family AT4G16110 46.721 5.09e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc154015g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc154015g00001 - K14491 gmx:100814930 271.552