Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153869g00001 ATGTCAAAGCTGTTGTCAAAGCACCTTCACCTCTGCTTCTTCAAGCTGAAACACCATCCAACCATCCTCTCTCCCTCACCCTCACCACCCTCCACACCCACCACCTCCTCCAACTACTTCTCCTCTTCATCCTCCTCCGTTGACGTTGACCCACCGGACTTGGCCTCCCTCTTCGCCTCCGACAGGTTCTTCTTCTCGTCGCCGGGCACATCCAACTCCATCATAGAGTCCCCCGACACGCGTGCTTCCATACCAAGCGGCGGAGTGAAGGTCCCAAAGTACTCCGTGGACCCTTACGTGGATTTCTTGCGCTCAATGCAAGAAATGATTGCTTCACGCCGCCACACTTTGGATGTCTCCAAAGATTGGGAGTATCTCCATGACCTCCTCTTGTGCTACCTCGCTCTCAATCCATCCCACACTCACAGGTACATTGTTCGTGCCTTCACCGATCTTGTCGTTGACCTTTTGTCTTCGTCTTCATCTTCATCTTCATCGTTGTCTTCACCGCCGGTGGTGAAATCCTCGTCTTGCCGGAGGCTCAAGAACCATCGCCGGCATAGTTCCAGTTTCTCAGGGCAGTTGGTGTAG 591 0.5347 MSKLLSKHLHLCFFKLKHHPTILSPSPSPPSTPTTSSNYFSSSSSSVDVDPPDLASLFASDRFFFSSPGTSNSIIESPDTRASIPSGGVKVPKYSVDPYVDFLRSMQEMIASRRHTLDVSKDWEYLHDLLLCYLALNPSHTHRYIVRAFTDLVVDLLSSSSSSSSSLSSPPVVKSSSCRRLKNHRRHSSSFSGQLV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153869g00001 196 MobiDBLite consensus disorder prediction 33 48 - -
Stsc153869g00001 196 MobiDBLite consensus disorder prediction 160 196 - -
Stsc153869g00001 196 MobiDBLite consensus disorder prediction 24 48 - -
Stsc153869g00001 196 NCBIfam uncharacterized plant-specific domain TIGR01568 90 158 IPR006458 -
Stsc153869g00001 196 MobiDBLite consensus disorder prediction 160 176 - -
Stsc153869g00001 196 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 34 159 IPR038933 GO:0045892
Stsc153869g00001 196 ProSiteProfiles OVATE domain profile. 91 155 IPR006458 -
Stsc153869g00001 196 Pfam Transcriptional repressor, ovate 95 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153869g00001 Stsc-Chr153869 3385 5133 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc153869g00001 Ovate 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153869g00001 - - aip:107616734 248.44