Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153635g00001 ATGAAATTACAGGGTTACAACATTGCATGTGGAACACGAGTTATTGTGAATGCGTGGGCAATTGCAAGAGATCCTAAGTATTGGGACCAACCTGAAGAGTTCAAACCTGAGAGGTTCTTGAATAGTTCAATTGATGTGAATGGGAATGATTTCCGGTTGATTCCGTTTGGGGCAGGGAGGAGAGGATGCCCTGGAATAGTGTTTGCTATGGCTGTCAATGAACTTGTGCTGGCCAACCTTCTTTACCAATTTGATTGGGCATTACCATCAAATGAGAGCGATAACTCCTTGGATATGTCAGAAACAATTGGAATAACCATGCATAAAAAGACTCTCCTTATAGCAATTGCAACCCCAAGAGAATAA 366 0.418 MKLQGYNIACGTRVIVNAWAIARDPKYWDQPEEFKPERFLNSSIDVNGNDFRLIPFGAGRRGCPGIVFAMAVNELVLANLLYQFDWALPSNESDNSLDMSETIGITMHKKTLLIAIATPRE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153635g00001 121 PRINTS E-class P450 group I signature 53 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153635g00001 121 PRINTS E-class P450 group I signature 17 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153635g00001 121 PRINTS E-class P450 group I signature 63 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153635g00001 121 Pfam Cytochrome P450 1 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153635g00001 121 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 56 65 IPR017972 GO:0005506|GO:0016705
Stsc153635g00001 121 PANTHER CYTOCHROME P450 71B11-RELATED 2 118 - -
Stsc153635g00001 121 Gene3D Cytochrome P450 1 115 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153635g00001 121 SUPERFAMILY Cytochrome P450 2 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153635g00001 Stsc-Chr153635 2668 3035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153635g00001 1 111 Cytochrome P450 AT3G26230 56.757 1.54e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153635g00001 - - dcr:108195525 178.718