Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153614g00001 ATGGCGGAAAGCAGTTCGAATCCTCAGGATCTGAATTCTAACCATGAATTAGGGCAATTAGAGGAGCAAATGGAGGATTTCTACAATGAGTATGCTAAACAAGCTGGATTTGCTACTAAAAACATAAATTCACAGAGGAATAAAGAGACCGATGCAATCAAGAATCTACTCTTCACATGTAATAGAGAGGGGAAAAGGACATCTGACATACCTGAAGCTGAGAAGACGAATCCGATGTCTCCGGCAAATTGTCCTGCAAGGATTTTTATCCATATTCAGAAGAAGACTCAACTTTATGTTATTTCAAAGGTTGTATTGGAGCATTCACATCCTTGCTATGCCGATCTTGCATAA 354 0.3927 MAESSSNPQDLNSNHELGQLEEQMEDFYNEYAKQAGFATKNINSQRNKETDAIKNLLFTCNREGKRTSDIPEAEKTNPMSPANCPARIFIHIQKKTQLYVISKVVLEHSHPCYADLA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153614g00001 117 MobiDBLite consensus disorder prediction 1 18 - -
Stsc153614g00001 117 MobiDBLite consensus disorder prediction 1 20 - -
Stsc153614g00001 117 Pfam FAR1 DNA-binding domain 26 112 IPR004330 -
Stsc153614g00001 117 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153614g00001 Stsc-Chr153614 1875 2744 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc153614g00001 FAR1 7.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153614g00001 - - aip:107614666 96.2857