Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153570g00001 ATGGATGCTCGAAGCTATTTCTTCGATTCGGAATCTGCAAATGGCGCAGAATCGAGCATGCATTTTTGCCTTGACGTGGATGAGGAGTATATTCCAAAGGCTGGAATGACTTTTCCATCACTTGAAGTAGCTGTTGATTTCTACAAAAAATATGCTAAACGTGCTGGGTTTTCTACTAAAATAAGGAACACCAATAGGTGTAGGGAAACCAAGGAAATAAAGAATCAACTCATCACATGTAACAGAGAGGGAAAATGGATATCCGAAATACCCCAAGCTCAGATGTTACCTCAGCATAGGGAGCTCAGCATGCAAGTTCGTTGCACTATTGAAAACAACGATCAATCCGGTATTAGACCAAACCAAACATATCAATCGCTTGTGAATGCTGCTGGTGGTCACAACGAGTTGGGGTTCATTGAAAAAGATGTAAGAAATTACATCACGAGGGAGATTCGGAATGTGTCAGAAGAGGAAGATGCAAATGAGCTGGGAAAGTACTTCTATCGGATGAAGGAGTAG 522 0.4157 MDARSYFFDSESANGAESSMHFCLDVDEEYIPKAGMTFPSLEVAVDFYKKYAKRAGFSTKIRNTNRCRETKEIKNQLITCNREGKWISEIPQAQMLPQHRELSMQVRCTIENNDQSGIRPNQTYQSLVNAAGGHNELGFIEKDVRNYITREIRNVSEEEDANELGKYFYRMKE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153570g00001 173 PANTHER OS01G0519700 PROTEIN 93 171 - -
Stsc153570g00001 173 Pfam FAR1 DNA-binding domain 46 86 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153570g00001 Stsc-Chr153570 322 2265 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc153570g00001 FAR1 3.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153570g00001 - - aip:110271906 180.259