Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153539g00001 ATGGAGTCTACACGCCAACCACCAAGTGTAATTTTAAAATTGATGGGTCTTGATAGAGTGTCTCCCCGCAAACCTGTTCGAGATAAACCGAAAGTGCTCTCTGAGGAATACCTGCAGAAAGTTGCATCCATTGGTGTTAGGAAGAAGCGTTCATCACGCCAGCATCGTTCCCTTGGAAAGGGTACTGATGATGAAGAAATGGATGAATCCGAGGATGTTTCGAGAGTGGTCAAAACAATAAGGAGAGACAAGCATCATAATCCAACTAGGGAGGTGAATCAAGGAAAGCTCTTGCAGAAAGATGTGTATGAACATGGAGAGGCTGGATTGTATGAATTACTTAGGCTTCCGAAATCTCAATTGGACATGAAGGATGAAACTTTGAACTCAGCTATTTTGAAGGCGAATTCTAGAAAGGAGGGAAATGGAACCAATGGAGTTTTATTACCAAGTTCCTGCAAATATTCTCGTTTGGCTACTAAAAACATGATGGAATATCCTGAAATGAGAGAGACAAGGAAGGTTTCTTGCGGCGATGATTTTGGAAAGCAGAATTTTAGATCTTTTAGAAAAACATCCAACAATGTTTCTGTGCAAGTGGGAAATTCTACAAACAGAGTTTTAGGTACTGTTCCAGGAGATGGAACAACAAACATGAATAAGCAAAGTGGCTTTGGTAATTATAACATCAAAACAAACCTCAGATGCAAGGTTGATGGGAAGCATAGTCGTGCTAGAAAAGCAGGAATGACCAGGTCTCTTGGTGGATCTTCTGCTGTTGCTGATAATCGCAGATCCGTCACTGAAGATAACCTTTTTGAGAAATATTGGGGTTTGAGGAAGAGTTCAAAAAATTTGCCAACACAGAAGTCAACAAATCAAAGTATCAACCAGAATGATTATTCAGAAGCTATGGACCTTAGGTCCAGCAATGAGAAATCCCAATCTTCTTCCTCTTTTCCGGATAATAATCATAGTGAAGAGAATTACATTGACCTACATAATCCAACCATGCAGCAGTGTGAATCAACAGGCTTACTGGGAGACAGTGATGCTTTGAGCCACAGTTCATCTGCTTCAACACAACAGGATGCTCCAGAACTTCAAGAAGATTCTGTGTCTTCACTTTTATCTGGAACTGACCCAGATTCTCTCGGTAGCTCCGAGGATTCATACGAACCAAGTCCAGTTTCAGTCTTAATGAATCCTTCATTTGGAAACAAAACTTCGTTTAATTTGAAGGCTGCTGGAGCTGATGTATATGACTTCTCTGAGGTTGATGATGAAGGATTTGCCTTGAATGTTTCAAGTGATGAAGAGTGCGGAGATAAATCTGTTACTGGTGAATATGAAGAGAAGAAAGATTTAGTAGGATCATTTGGATCCGAGGAAAGTCGGGATTTCTCCTATGTTGTTGAGGTATTAACCGAAGCAGGTGTTTTGAACCGGAGCTTGTTTACCGACTTCTCTACATGGCACTCTGCAGAATGCCCCATTAGCACTTTGGTCTTCGAAAACCTTGAGAAGAAATTCGGTGAGCAGCAATTTTGGAAACGGTCCGAAAGGCGGCTTCTTTTCGACCGAATCAATGTAGGGCTATCGAAGATTATGCAGCCGTGTTCATACGTCCCAACATGGGAAAAGCCAGTGTCGAGAAGGTTGAGGGCGGAACTAAGCCACGACATGGTTGAAGAGGAGATGTGGGGGATGCTTGTTGCTCAGGAGAAGAAAGCTGTTAAGAATTCAGCAGATAATGATATGCTTGGAGGTGATATTAGTTGGTTAGATTTAGGTGAAAATATTGAAGAAATTGTTATAGAGATAGTTAAGTTGTTAATTGAGGAGCTTGCACAAGAGATGGTAGATAGCTTGGAAAATTTTTGA 1884 0.4114 MESTRQPPSVILKLMGLDRVSPRKPVRDKPKVLSEEYLQKVASIGVRKKRSSRQHRSLGKGTDDEEMDESEDVSRVVKTIRRDKHHNPTREVNQGKLLQKDVYEHGEAGLYELLRLPKSQLDMKDETLNSAILKANSRKEGNGTNGVLLPSSCKYSRLATKNMMEYPEMRETRKVSCGDDFGKQNFRSFRKTSNNVSVQVGNSTNRVLGTVPGDGTTNMNKQSGFGNYNIKTNLRCKVDGKHSRARKAGMTRSLGGSSAVADNRRSVTEDNLFEKYWGLRKSSKNLPTQKSTNQSINQNDYSEAMDLRSSNEKSQSSSSFPDNNHSEENYIDLHNPTMQQCESTGLLGDSDALSHSSSASTQQDAPELQEDSVSSLLSGTDPDSLGSSEDSYEPSPVSVLMNPSFGNKTSFNLKAAGADVYDFSEVDDEGFALNVSSDEECGDKSVTGEYEEKKDLVGSFGSEESRDFSYVVEVLTEAGVLNRSLFTDFSTWHSAECPISTLVFENLEKKFGEQQFWKRSERRLLFDRINVGLSKIMQPCSYVPTWEKPVSRRLRAELSHDMVEEEMWGMLVAQEKKAVKNSADNDMLGGDISWLDLGENIEEIVIEIVKLLIEELAQEMVDSLENF 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153539g00001 627 MobiDBLite consensus disorder prediction 239 262 - -
Stsc153539g00001 627 MobiDBLite consensus disorder prediction 304 398 - -
Stsc153539g00001 627 Pfam Domain of unknown function (DUF4378) 467 619 IPR025486 -
Stsc153539g00001 627 PANTHER AFADIN 1 96 - -
Stsc153539g00001 627 MobiDBLite consensus disorder prediction 44 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153539g00001 Stsc-Chr153539 464 3712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153539g00001 382 621 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.333 6.21e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153539g00001 - - adu:107486420 961.829