Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153506g00001 GATCCTAAAGGAGGTGGAAAAGCTCCAGTTCCAGCTTCGAAGAAGAAGCCTCGTCCCAAGCAGTTTGGGATCGGAGGAGCATTGCCGCCAAAGAGGGATTTGACTCGTTTCGTGAAGTGGCCTAAGATCGTACAAATCCAGAGGAAGAAGAGGATCCTCAAGGGTTACTTTCTTGATTATCTTTTGTTGATCTTACATGTAGCAACCAGCCTTTTCAAGATACTTCTGAAGTATAGGCCAGAAGATAAAGCTGAAAAGAAGGAACGGCTTTTGAAAAGGGCTCAGGCTGAGACTGAGGGCAAAACTGTTGAAGCTAAGAAGCCCATTGTTGTGAAGTATGGTCTCAATCATGTTACCTACCTTATTGAGCAGATTGTCCACAAGAAAACCGCATCTGTTTTGTGCTTGACCAGTGTCAAGAACAAAGACAAATTAGAGTTTAGCCGAGTCCTAGAGGCTATTAAGGCTAACTTCAATGACAAGTTCAATGAGTACAGAAAGAAATGGGGTGGTGCTATTTTTGTGTTTTCACTCTACCGTTGA 543 0.4328 DPKGGGKAPVPASKKKPRPKQFGIGGALPPKRDLTRFVKWPKIVQIQRKKRILKGYFLDYLLLILHVATSLFKILLKYRPEDKAEKKERLLKRAQAETEGKTVEAKKPIVVKYGLNHVTYLIEQIVHKKTASVLCLTSVKNKDKLEFSRVLEAIKANFNDKFNEYRKKWGGAIFVFSLYR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153506g00001 180 Gene3D - 40 124 IPR029064 -
Stsc153506g00001 180 Gene3D - 125 177 IPR029064 -
Stsc153506g00001 180 MobiDBLite consensus disorder prediction 1 26 - -
Stsc153506g00001 180 PRINTS Ribosomal protein L7A family signature 19 36 IPR001921 -
Stsc153506g00001 180 PRINTS Ribosomal protein L7A family signature 36 53 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153506g00001 Stsc-Chr153506 1493 3142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153506g00001 2 174 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 54.936 1.22e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153506g00001 K02936 - gmx:100775472 257.684