Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153496g00002 ATGACAGACCCACATTATTCCAATCTATATGCTTCATCAGGAAGGTTCAACTTCATGCCCCTCCATCCTTACTACTTCCCTTCTTATTCCTCTTCCTCCTCCTCTTCTTCATCTTTAATTTCTAATCAAAATTCCAATAACACTTCCCTCTTCTCATCGTCGTCATCATCATCACCACCGTTCCCTCTGGCTTTCTCAAACACCAGAGTATTCTCCGTCCAATTCGAACCACCCACTTCATCTTCTGCTTCTTCCATGGCGCTTCCAACTCCTTCTTCCCCTCCTCTTATAGAGGCCCTTCCTCTCATAAACACCATAAGCCTCAAAACCAATAACAATAATATCAAAGAACCATCAAATAACAACAGTGATCAAAAAGTGGCACTGTTCAATAATAAGAGAAGAAAGGACAACAACAACAACAAAGATGAAGAGAATAATAATCTTCTTATCGATGACAATGACAATGATGAAACTGTGGCAGTAGCGCTGCGAATAGGGCTTCCTGATATTGATGGGCCAATTACGAAGAAGAAGATGTCATCAATGGCGGGTGATGAAAAAGATGAAGTGATGAGCGTGGTTTGTGAGCAGCCTTTGTTATTAAAGAGATTTATTAACAATAATAATAATAATAATAATAATAATAATAATAACAAGGCACATCAGTTTCAGTATTGGATTCCCACACCTTCTCAGATTCTCATTGGTCCTACTCAGTTTTCATGCCCTGTGTGCTCCAAGACTTTCAACAGATACAATAATCTTCAG 771 0.3904 MTDPHYSNLYASSGRFNFMPLHPYYFPSYSSSSSSSSSLISNQNSNNTSLFSSSSSSSPPFPLAFSNTRVFSVQFEPPTSSSASSMALPTPSSPPLIEALPLINTISLKTNNNNIKEPSNNNSDQKVALFNNKRRKDNNNNKDEENNNLLIDDNDNDETVAVALRIGLPDIDGPITKKKMSSMAGDEKDEVMSVVCEQPLLLKRFINNNNNNNNNNNNNKAHQFQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQ 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153496g00002 257 MobiDBLite consensus disorder prediction 111 151 - -
Stsc153496g00002 257 MobiDBLite consensus disorder prediction 37 58 - -
Stsc153496g00002 257 MobiDBLite consensus disorder prediction 129 149 - -
Stsc153496g00002 257 PANTHER ZINC FINGER PROTEIN WIP2 58 257 IPR043584 GO:0003700|GO:0010468
Stsc153496g00002 257 MobiDBLite consensus disorder prediction 111 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153496g00002 Stsc-Chr153496 6361 7208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153496g00002 88 257 C2H2 Transcription Factor Family AT3G20880 34.503 1.97e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc153496g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153496g00002 - - gmx:100794446 135.191