Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153387g00001 ATGGCTTTTCTCACCATGATCATACTCCTCTCCCTCGTAGCACTTCTTCTTTACAAGCTCTACTTCCGGCTAAGGTTCAAGCTCCCACCGGGCCCACGTCCGTGGCCAGTTGTCGGAAACCTCTACGACATAAAGCCCGTGAGGTTCCGATGCTTCGCGGAGTGGGCCCAGTCGTACGGCCCAATTTTCTCCGTGTGGTTTGGATCGACTTTGAACGTGATTGTTTCGAATTCAGAGCTGGCAAAGGAGGTGCTGAAGGAGCATGACCAACAGCTGGCGGACCGGCACAGGAGCCGATCTACGGCGAAGTTTAGCCGGGGCGGGAAAGACCTGATTTGGGCCGATTATGGGCCTCACTACGTGAAGGTGAGGAAGGTTTGCACACTTGAGCTCTTCTCACCGAAAAGGCTGGAGTCTTTGAGACCTATAAGAGAAGATGAGGTCACTGCCATGGTTGAATCCATTTTCAATGACTGCACCAATTCTGAAAACTTAGGGAAAAGTTTGTTGGTTAAGAAATACGTGGGAACAGTGGCATTCAACAACATCACTAGGCTAGCATTCGGCAAAAGATTTGTGAACTCTGAAGGTATAATGGATGAGCAAGGAGTAGAATTCAAGGCTGTAAATGAAAATGGATTGAAGCTAGGAGCATCTCTGGCCATGGCCGAGCACATTCCGTGGCTACGGTGGATGTTCCCTCTGGAAGAGGAGGCTTTCGCGAAGCACGGTGCTCGCCGCGACAAACTGACCAAAGCCATCATGGAAGAGCACACTCAGGCGCGGCTGAAATCCGGTGCCAAGCAACATTTTGTTGATGCCCTCCTCACAGTGCAAGATAAATATGACCTTAGTGAAGACACCATCATTGGTCTACTTTGGGACATGATTACCGCTGGCATGGACACAACAGCAATATCAGTTGAGTGGGGCATGGCTGAACTAATCAAGAACCCAAGAGTCCAACAAAAAGCCCAAGAGGAGCTAGACAGGGTAATCGGGCTTGAAAGGATAATGACCGAATCAGATTTCTCAAGCCTCCCATACCTACAATGTGTGGCAAAGGAAGCCCTAAGGCTCCACCCACCAACCCCACTAATGCTCCCACACAGGGCCAACAGCAACGTCAAAGTTGGTGGCTATGACATACCGAAAGGCTCCAACGTGCACGTGAACGTGTGGGCAGTGGCACGTGATCCAGCTTTATGGAAAAACCCACTTGAGTTCAGGCCCGAGAGGTTCCTTGAGGAGGATGTGGACATGAAGGGGCATGATTTTAGGCTGCTCCCTTTTGGTGCTGGACGTAGG 1308 0.5069 MAFLTMIILLSLVALLLYKLYFRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIFSVWFGSTLNVIVSNSELAKEVLKEHDQQLADRHRSRSTAKFSRGGKDLIWADYGPHYVKVRKVCTLELFSPKRLESLRPIREDEVTAMVESIFNDCTNSENLGKSLLVKKYVGTVAFNNITRLAFGKRFVNSEGIMDEQGVEFKAVNENGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDKLTKAIMEEHTQARLKSGAKQHFVDALLTVQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWGMAELIKNPRVQQKAQEELDRVIGLERIMTESDFSSLPYLQCVAKEALRLHPPTPLMLPHRANSNVKVGGYDIPKGSNVHVNVWAVARDPALWKNPLEFRPERFLEEDVDMKGHDFRLLPFGAGRR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153387g00001 436 FunFam Cytochrome P450 22 436 - -
Stsc153387g00001 436 Pfam Cytochrome P450 29 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 Gene3D Cytochrome P450 23 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 428 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PANTHER CYTOCHROME P450 98A9 6 436 - -
Stsc153387g00001 436 SUPERFAMILY Cytochrome P450 29 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 CDD CYP98 59 436 - -
Stsc153387g00001 436 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc153387g00001 436 PRINTS P450 superfamily signature 429 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153387g00001 Stsc-Chr153387 4276 8086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153387g00001 6 436 Monolignol Biosynthesis Gene Families AT2G40890 79.861 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153387g00001 K09754 - qsa:O6P43_006317 796.964