Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153334g00001 ATGGAGTTCACCGTGGCAGAAAAGTCCGTCTTTGCTGAGTGGGCAAGTCATCTGTGTAAGAGGTTAGAAAAATCAGAGAAGGAATTAACTAAAGAAGGTAACAGAATTTCAAGGCCTAAAATACAAGATATTCCAAGGTACATGGCTGAAAAGGTGGAGTTTCAAAGATATTACAAGCCACAGATCATTTCACTTAATAAATTACATGCAAGAACCCCCCAAGGAGAGCTATATAAGGAAGCTTGGGCAGCAATGTATCTTAAGGATACCAATCTAAAGCTTAAAGATTTATATATGGAAATCTGTTATGAGAATGCATCATATCCAATGGATATAAAACCAATGTGGAGGAACTTACACAGTGAGGTGTTCCGCCGTCACTTAAATGCAGATAGCCTCATAATGGATGGATGCTGTGTACTTCAGTTGCTGCAAAAATCAAACAATTCAGTTGATCCAGAGCAAGGGCTTAAGATCAGCATTGACAAGATTGTGAGGGTGCACCAAGATCTCCTTATCATGGACAACCAAATTCCTTTCCAATTACTCAGACTCTTGTGTCATGATGAAGCCATGCTGGAACAATGCCTCCACAACTTCCTTCAAGTTCATGGTATTCTGATTGAGTCATCAGCACCAAAACTTCCAAGAAAGAAAAAGGAGAATCAAGAAGTGAAGGTAGCTGTGGATGAAGAAGAAGAAGAAGATGATGAAGAAGATCCCGTCCATCTTCTAGATTATCTGCGGAGGGCCCTCTTGATGAAAGTTCAACACAAATTCTATAAGGATATCAACAACAAGAAGATGAACAGGGAATGCCTGCATCTTAGAAAGTATAGGATTGGGACCATCAGGGAGCTCAAGGCAGCTGGGATTCATGTCATAAAATATTCCCATTCCCATCGCAACTTTCTCTTCCCTGATTTCCATAAGGTAACACTGCAGCTTCCAGAGCTCAATGTGGATGGCACAACGGCTCATATATTCCTCAACCTGGTAGCTTATGAGATGTGTCCTGATTTTCGCAACAGCTTCGAGATCAGCTCATTTTTAGTGTTCATGAGCTCTCTCATTGACCAGCAGGAGGATGTGAAGGCGTGGTTGTTTATTTACCAAGAAAGTGGTGAGAAATATGCTCACTTGATGAAGTTTGAGGGAGCTTCTGAGAATCTAAAACTGTTCAAAGCAGATTTGTTGAGTTATGAATCTATTTACTCTGCAATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTTGCCCTACGGTGGCGAAAGAGCAGGCGCTGGATTTCGCAGAAAGAACCGGGATTGATCTTGTGAGAATTTGTCCTACTGTTATGTTGGGGCCAATTTTGCAGTCAACTTCTGTGAATGCAACTAGCTTGTTTCTCCTCAACCTTCTTAAAGGCTGTGAGCCAGTGGAGAATAAGCTTAGGTGGATAATAGAGGTAAGAGATTTAGCAGATGCATTACTATTGGCTTATGAAAAGATTGAAGCACAAGGGAGATACATATGCACTTCATGCCCTGCTAAGCCAAGGGATTTGGTACACAAATTGAAGAGCTTATATCCAAATTACAACTACCTTACAGAGTTTATTGAGGTGTATTATTACATAAGGTTGAGCTCGGAGAAACTTCAGAGACTTGGTTGGAGATTTTTACGAGTTTCATATAAGGAGAGGCCAACATCTGAAAAAACCTTTATAAGGTCTTGGGCTCTCCCACCACATGAGTTAGTTTTTCTGGTGTGGTTATCCCAAGATCTTATTGCTCGTAACAATGATGTTTTCGTTGAGAGTCGGCAACTCGAAAGGGTCTTCTATAGAGGATTCTGA 1836 0.4101 MEFTVAEKSVFAEWASHLCKRLEKSEKELTKEGNRISRPKIQDIPRYMAEKVEFQRYYKPQIISLNKLHARTPQGELYKEAWAAMYLKDTNLKLKDLYMEICYENASYPMDIKPMWRNLHSEVFRRHLNADSLIMDGCCVLQLLQKSNNSVDPEQGLKISIDKIVRVHQDLLIMDNQIPFQLLRLLCHDEAMLEQCLHNFLQVHGILIESSAPKLPRKKKENQEVKVAVDEEEEEDDEEDPVHLLDYLRRALLMKVQHKFYKDINNKKMNRECLHLRKYRIGTIRELKAAGIHVIKYSHSHRNFLFPDFHKVTLQLPELNVDGTTAHIFLNLVAYEMCPDFRNSFEISSFLVFMSSLIDQQEDVKAWLFIYQESGEKYAHLMKFEGASENLKLFKADLLSYESIYSAIVGCSAVFHVACPTVAKEQALDFAERTGIDLVRICPTVMLGPILQSTSVNATSLFLLNLLKGCEPVENKLRWIIEVRDLADALLLAYEKIEAQGRYICTSCPAKPRDLVHKLKSLYPNYNYLTEFIEVYYYIRLSSEKLQRLGWRFLRVSYKERPTSEKTFIRSWALPPHELVFLVWLSQDLIARNNDVFVESRQLERVFYRGF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153334g00001 611 Gene3D - 424 567 - -
Stsc153334g00001 611 Pfam Plant protein of unknown function 41 365 IPR004158 -
Stsc153334g00001 611 MobiDBLite consensus disorder prediction 219 240 - -
Stsc153334g00001 611 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 372 558 IPR036291 -
Stsc153334g00001 611 Gene3D - 355 423 - -
Stsc153334g00001 611 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 31 365 IPR004158 -
Stsc153334g00001 611 Coils Coil 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153334g00001 Stsc-Chr153334 878 3922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153334g00001 421 553 Monolignol Biosynthesis Gene Families AT2G33590 54.478 1.26e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153334g00001 - - aip:107614684 488.804