Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153269g00001 ATGGATTATGTGAATTTGGATTGCCTCATACTAGTGGATCATCTTTGTGAAGATCCTGAGCAAATTTCACTAGAATGTAACAATGTTGGAGTGGAACAACCATATGATGATCCTATGAATCCATCTTCTGAACCATGCCCTCTAAATTCTGTTATTGAAGAGGTGCCAGATCATAGTCACATATTAGATGATGAAATTCCTAGAACAGGCATGTATTTTGCTTCTTTAGAGGAAGCTCATGATTTTTACAAGAATTATGCGGAGAAAGTGGGGTTTGTTATTAAGATTAGGAATACAAATCATGTTAAGAATGCTAAGGGTGAGAAGATTCCAATTAACCAGTCAATCCATTGTAATCGAGACGGTAATCGCATGTCACGAGCGAAGGCACCAAGAAGATCGAAGAAGATCGCGGCTGCCATGTGCAATGCAAGGGTATATGTCAAGTTTAACAAAGACAATAGTAAATGGTTTCCAAAATTTGGACCAATACAGTACGGATGA 504 0.381 MDYVNLDCLILVDHLCEDPEQISLECNNVGVEQPYDDPMNPSSEPCPLNSVIEEVPDHSHILDDEIPRTGMYFASLEEAHDFYKNYAEKVGFVIKIRNTNHVKNAKGEKIPINQSIHCNRDGNRMSRAKAPRRSKKIAAAMCNARVYVKFNKDNSKWFPKFGPIQYG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153269g00001 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 157 - -
Stsc153269g00001 167 Pfam FAR1 DNA-binding domain 81 157 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153269g00001 Stsc-Chr153269 1397 2168 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc153269g00001 FAR1 1.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153269g00001 - - ahf:112772717 127.102