Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153218g00001 ATGAACCCCGTTCATCAGCGCAACGAGATCGGTGTCTTCTACAAGTTCCTTTACATCTCCCTCGGCCTCGCCGGATTCCTTATGGTTATGATCATTGTCCAGAAGAACACCACTTTCAATCAGACCGAGTACGGTGCCAGCGCCGCCATGGTTCTCTTCCTTCTCTTCCTCCCTCTTGCTGTTCTCTTCGGCGAACAGTTTAAGCATTCTTCAGTTGAAGATCCCTTACCGAAGGTGAAAGTAGTAGCCGCAGCCGCCGAAGCAGAGAATAATAACAATAATCACATTAACAACAAAATAGAAAGCAGATGGTGGGAAAATGTTTTGAGTCCACCGGAGAGAGGGGAAGACTATAACATACTCCAAGCTTTGTTCAGCATAGACATGTTGATATTGTTCTTCGCCGGAACATGCGGTTGCGGCGGAACGTTAACCGCAATTGACAACTTGGGGCAAATTGGAACCTCCCTTGGATACCCAAAGAAAAGCATAAGCACGTTTGTGTCGCTAGTGAGCATATGGAACTATCTCGGTCGAGTATTTTCCGGGTTTGTTTCGGAACACATGCTGATAAAGTACAAATTCCCAAGACCACTCATGTTCACCATGATTCTTCTCTTGTCTTGTGTTGGACACTTGCTAATAGCATTCAATGTGCCCAACAGTCTCTATGTGGCTTCTGTCATAATTGGATTTTGTTTTGGTGCGCAGTGGCCTTTGATTTTTGCCATTGTTTCGGAGGTGTTTGGTCTCAAGTACTACTCAACTCTGTATAACTTTGGAGGCATGGCGAGTCCGATTGGGTTGTATGTGCTGAATGTGAGGGTGACTGGGCATTTGTATGACAAAGAAGCTAAGAGGCAATTGGCGGCATCTGGGATCAAAAGACACAGTGGTCAGGAATTGAATTGTGTTGGGACCAGTTGCTACAAGCTGTCCTTTCTTATAATTGCTGCAGCTACTTTTGCTGGTGCTATTGTTTCGCTCATTCTGGTTGTTAGGACATATAGCTTCTATAAAGGTGACATTTACAAGAGGTACAAGCTGGAGGAGGAGGAAGGTGCGGCCGCGCTTCATAACGGCCGCGAAAATGGACAAGGAATTAAAGTTGTCGCGGCGTAA 1122 0.4581 MNPVHQRNEIGVFYKFLYISLGLAGFLMVMIIVQKNTTFNQTEYGASAAMVLFLLFLPLAVLFGEQFKHSSVEDPLPKVKVVAAAAEAENNNNNHINNKIESRWWENVLSPPERGEDYNILQALFSIDMLILFFAGTCGCGGTLTAIDNLGQIGTSLGYPKKSISTFVSLVSIWNYLGRVFSGFVSEHMLIKYKFPRPLMFTMILLLSCVGHLLIAFNVPNSLYVASVIIGFCFGAQWPLIFAIVSEVFGLKYYSTLYNFGGMASPIGLYVLNVRVTGHLYDKEAKRQLAASGIKRHSGQELNCVGTSCYKLSFLIIAAATFAGAIVSLILVVRTYSFYKGDIYKRYKLEEEEGAAALHNGRENGQGIKVVAA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153218g00001 373 Pfam Major Facilitator Superfamily 149 336 IPR011701 GO:0022857|GO:0055085
Stsc153218g00001 373 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 342 - -
Stsc153218g00001 373 FunFam Nodulin family protein 120 341 - -
Stsc153218g00001 373 Pfam Nodulin-like 5 62 IPR010658 -
Stsc153218g00001 373 SUPERFAMILY MFS general substrate transporter 11 336 IPR036259 -
Stsc153218g00001 373 Gene3D MFS general substrate transporter like domains 125 338 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153218g00001 Stsc-Chr153218 4645 5766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153218g00001 1 348 Nodulin-like Gene Family AT2G39210 62.983 3.20e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153218g00001 - - gmx:100808975 511.531