Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153186g00001 ATGGAGTACGCCGCTGGTGGCGAGCTTCTCCGCCGTGTCTCCGCCGACGGAAGGATGACGGAGAATTTCGCCAGAAGATACTTCCAGCAGCTGATTTCCGCCGTCGCGTACTGCCACTCTCACGGCGTCTTCCACCGCGACCTCAAGCTCGAGAATCTCCTCGTCGACGAGAACATGGACCTGAAGGTAACAGATTTCGGGTTGAGTGCGGGTCGGAGTCAAGTCGGGTCGGATGGGTTGTTGCACACGGTTTGCGGTACTCCTGCTTACGTGGCACCCGAGATTCTCGCGAAAAAAGGCTATCGCGGAGTCAACGTTGACATTTGGTCTTGCGGTGTAATTTTATTCACTCTCGTTGCGGGGTATTTACCCTTCAATGATTACAATATTACCCTTTTGTACAGAAAGATTTACCGAGGGCAGTTTCGGTATCCTAAGTGGGTCTCGAGTGAATTTAAGCACTTGGTGTCCAGGTTGTTAGATAGGGATCCCGAGACGAGAATTACTATTGACGAGATTATGAACGATCCGTGGTTTTGTCGGGGCGGGTATAAGTACCCGACCCGAGTGATGCCCGAATTGGATGAGGACCACGTGATGGCGAAAGATTTGAACGCATTTGATTTGATTTCTTTCTCATCCGGGTTTGACATTTCGGGTTTGTTGACCCACTCGGAGTATTTGAATTGCGTGGAGCGGTTTGTGTCGAAAGAGAAGCCAGAAAAGATTTTGGAGAGGGTGAAAGCGATGGTGGATAAAGTGGAGAGGGTGGTAGTGAGAAAAGACGAAAAGGCCTGTGAAGGAGTGAAGTTGGAGGGTTTAGATGGTAATTTTATAATTGCTGTTAGGATTTATCGGTTAATGAATGAATTGGTGGTTATTGAGGTAAAAAGAAAAGAGAAGAAAGTGGGAGGTGGACATTTTTGGAGGACTCAGTTGAGACCTTTGCTTCTTGAATTGGCTCTTCTTCATGGAAATGCTTCCAAATAA 990 0.4778 MEYAAGGELLRRVSADGRMTENFARRYFQQLISAVAYCHSHGVFHRDLKLENLLVDENMDLKVTDFGLSAGRSQVGSDGLLHTVCGTPAYVAPEILAKKGYRGVNVDIWSCGVILFTLVAGYLPFNDYNITLLYRKIYRGQFRYPKWVSSEFKHLVSRLLDRDPETRITIDEIMNDPWFCRGGYKYPTRVMPELDEDHVMAKDLNAFDLISFSSGFDISGLLTHSEYLNCVERFVSKEKPEKILERVKAMVDKVERVVVRKDEKACEGVKLEGLDGNFIIAVRIYRLMNELVVIEVKRKEKKVGGGHFWRTQLRPLLLELALLHGNASK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153186g00001 329 SMART serkin_6 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc153186g00001 329 Gene3D Kinase associated domain 1, KA1 199 321 - -
Stsc153186g00001 329 CDD CIPK_C 205 312 - -
Stsc153186g00001 329 Pfam NAF domain 203 260 IPR004041 GO:0007165
Stsc153186g00001 329 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc153186g00001 329 Pfam Protein kinase domain 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc153186g00001 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Stsc153186g00001 329 SUPERFAMILY Protein kinase-like (PK-like) 1 190 IPR011009 -
Stsc153186g00001 329 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 299 - -
Stsc153186g00001 329 ProSiteProfiles NAF domain profile. 199 223 IPR018451 GO:0007165
Stsc153186g00001 329 Gene3D Transferase(Phosphotransferase) domain 1 4 182 - -
Stsc153186g00001 329 FunFam Maternal embryonic leucine zipper kinase 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153186g00001 Stsc-Chr153186 772 1761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153186g00001 1 320 CBL-interacting serine-threonine protein kinases AT2G30360 52.266 5.92e-118 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc153186g00001 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153186g00001 - K12761 zju:107431021 350.903