Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153171g00003 ATGATTGGTGCAACCCTTAGAATGGGAGAATGGATTCGCGGGGAAGAGAGCTCGGTGTTTGAGACTGCCCTTGGAGTTAGCTTTTGGGATTTGATTCATAAGAGTCCCGAAATGATGAGCTCCTTCAATGAGTCCATGGCAGGTGATTCTCAAATGGTGAATGTGGCATTGAGAGATTGCAGTTTTGTGTTTGAAGGGATAGAATCTATTGTGGATGTTGGTGGTGGAAATGGAACCACAGCAAAAATCATCTGTGAGGCATTTCCTGAATTGCAATTCACTGTTCTTGACCTTCCACCAGTTGTTGCAAATTTCAACACAAGTGGGAATTTGAAATATGTTGGTGGTGACATGTTTGAATCAATTCCCCAAGCTGATGCAGTCTTACTAAAGTGGGTTCTACACGATTGGAATGATGAAGATTGCATCAAAATTTTAAAAAATTGCAAAAAATCTATATCAGAGAAAGGAAAAGTGATTATCATTGACGTAGTAATAAATAATGAAGAGCAAGATGAAGATGAAATGACCCCAATAAAACTTCTTTCTGATATAAACATGGCAGCTATATTTGGTGCAAAAGAACGAAGTGAAAAAGAATGGAAACAACTCTTCATAGAAGCTGGATTCAACAATTACAAAATATTTCCGATATTTGGTTTTAGATCTCTTATAGAAATCTATCCTTAA 690 0.3725 MIGATLRMGEWIRGEESSVFETALGVSFWDLIHKSPEMMSSFNESMAGDSQMVNVALRDCSFVFEGIESIVDVGGGNGTTAKIICEAFPELQFTVLDLPPVVANFNTSGNLKYVGGDMFESIPQADAVLLKWVLHDWNDEDCIKILKNCKKSISEKGKVIIIDVVINNEEQDEDEMTPIKLLSDINMAAIFGAKERSEKEWKQLFIEAGFNNYKIFPIFGFRSLIEIYP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153171g00003 229 Gene3D Vaccinia Virus protein VP39 1 229 IPR029063 -
Stsc153171g00003 229 FunFam O-methyltransferase ZRP4 1 229 - -
Stsc153171g00003 229 PANTHER O-METHYLTRANSFERASE 7 214 IPR016461 GO:0008168
Stsc153171g00003 229 CDD AdoMet_MTases 70 166 - -
Stsc153171g00003 229 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 229 IPR016461 GO:0008168
Stsc153171g00003 229 Pfam O-methyltransferase domain 9 211 IPR001077 GO:0008171
Stsc153171g00003 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 227 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153171g00003 Stsc-Chr153171 3642 5869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153171g00003 11 229 Monolignol Biosynthesis Gene Families AT1G51990 36.937 1.61e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153171g00003 K22588 - gmx:100818947 290.426