Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153161g00001 ATGGTTGCCCACACCATAGCCGTCCACAACCACACCGATCGGATCTTACCCGAACCGGATGTCTTCATTCACACCTCTGCCGGAACACGCATTCCAGCCCACTCTACTATTCTGGCTTCTGTGTCGCCGGTTTTGGAGACCGTCATAGACCGCCCGCGAAAACATCGCAGCTCCGAAATAATCATCCAGATTCACGGCGTTCCCTGCCAAGCCGTAGCCGCCTTCGTCACCTTCGTCTACACCTCCAGGTGCACGGAGGAGCAGATGGACAAGTACGGGGTTCACCTGTTGGCATTGTCGCACGTGTACAACGTGCCGCAGCTGAAGCAGAGGTGTACGAAGGGGCTGGCACAGCGGTTGACGGTGGAGAACGTGGTGGACTTGCTGCAGCTGGCGCGTCTGTGCGACGCGCCAGATCTAGAGGTGAGATGCATGAGGCTGCTGACGCGGCACTTCAAGGCGGTGGAGGACACCGAAGGGTGGAAGTTCGTTAGCAACAACGATCCCTGGCTTGAACTCGATATCCTTCGCTTCATCGATGAACAAGAAATGAGGAAAAAGAAATGCCAGAAGCACAGGGAAGAGCAGAGGGTGTATTTTGAGCTAAGCGAAGCCATGGACTGCTTGGAACACATATGCACCGAAGGATGCACTGAGGTGGGGCCATGCCACGTGGACAGCACCACCAGAAAGGAAAGGAGAAAGCCCTGCAGCAAATTCGACACGTGTCACGGCCTGCAGCAATTGATTCGGCATTTTGCCACGTGTGAAAAGAGGATGAACCGGGGGTGCTTGCGGTGCAAGCGAATGTGGCAGCTCTTCAGATTACATGCCTACGTATGCCACCAAACTGATTCTTGCAAGGTTCCTCTCTGCAGGCAAATTCAATTAAAGATGCAACAAGAGAAGAGAAAAGACGATTCAAGGTGGAAATTACTTGCGAAGAAGGTGGCCTCAGCCAGAGTCATATCTTCTTTGTCTCTTCCGAAGAGAAAGCGTGATGAGGAAATTAAAGTCACCGTGGACAATAATGGCTTCACAACTTTTGAATTACATTGA 1059 0.5241 MVAHTIAVHNHTDRILPEPDVFIHTSAGTRIPAHSTILASVSPVLETVIDRPRKHRSSEIIIQIHGVPCQAVAAFVTFVYTSRCTEEQMDKYGVHLLALSHVYNVPQLKQRCTKGLAQRLTVENVVDLLQLARLCDAPDLEVRCMRLLTRHFKAVEDTEGWKFVSNNDPWLELDILRFIDEQEMRKKKCQKHREEQRVYFELSEAMDCLEHICTEGCTEVGPCHVDSTTRKERRKPCSKFDTCHGLQQLIRHFATCEKRMNRGCLRCKRMWQLFRLHAYVCHQTDSCKVPLCRQIQLKMQQEKRKDDSRWKLLAKKVASARVISSLSLPKRKRDEEIKVTVDNNGFTTFELH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153161g00001 352 SUPERFAMILY POZ domain 20 149 IPR011333 -
Stsc153161g00001 352 CDD BACK 121 162 - -
Stsc153161g00001 352 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 334 IPR044513 -
Stsc153161g00001 352 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Stsc153161g00001 352 SMART BTB_4 19 120 IPR000210 GO:0005515
Stsc153161g00001 352 SUPERFAMILY TAZ domain 194 296 IPR035898 -
Stsc153161g00001 352 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Stsc153161g00001 352 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Stsc153161g00001 352 Gene3D - 121 193 - -
Stsc153161g00001 352 Gene3D TAZ domain 194 320 IPR035898 -
Stsc153161g00001 352 FunFam BTB/POZ and TAZ domain-containing protein 2 192 321 - -
Stsc153161g00001 352 Gene3D Potassium Channel Kv1.1; Chain A 18 120 IPR011333 -
Stsc153161g00001 352 SMART TAZ_2 196 293 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153161g00001 Stsc-Chr153161 3470 7265 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc153161g00001 BTB 2.6e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153161g00001 - - cam:101496955 538.11