LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc153094g00001	ATGGTGGGGTCAGGTGGAGGAGGAGGAGGAGGAGGTGGTGGAACAGGTGAGAGGAGCAAGGAGGCAGTTGGGATGATGGCTCTTCATGAGGCACTCAGAACCGTCTGTCTCAACTCTGACTGGACCTACTCTGTCTTCTGGACCATCCGCCCACGCCCGAGAGTTAGAGGTGGCAATGGTTGCAAGGTTGGAGACGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTCTGCCGAGGGAGGAGTGCAACATCAGCAGGGTGTCTTGTGGAAGACATGGAAGGAGGAGGAGAGGATCCAGTGAGGAAGGCGTTCAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAGGTTGCATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTCCCTCCTGAATGGACCGACCAGTTTGATTCTGGCATTCAGACTATTGCTGTAATTCAAGCTGGACATGGGCTTCTTCAGTTAGGCTCTTGCAAGATTATTCCTGAGGACCTGCATTTTGTGCTAAGAATGAGACACACATTTGAATCACTAGGCTACCAATCTGGTTTCTACCTCTCACAACTATTCTCTTCAACAAGGAACACTTCATCTTCAACTTCAATCCCTTCAAAGCCATCTTCAATTCCAATTAGGCCACCAGCACCACTCTTCAACTGGCCTCACAGGCCATCGCTTCCGTCTTCGGCCGCTTCGATGCTCTCCTCGCCCAATTTCGCCGCATCGAGGATGGGATTCCCAAGCAAGGACTCTGAGACACACATGTTTCTCATGCCACACCATCACCCCCATCACCAAGAACATGGTGCAAGGATTGAGGACATGATTGGAGCTACTAATGCTGGTGGTGGTGGTGGTGGTGGTGGTGATCATGACAATGATATCAAATGGCCTAATGGATTGTCCTTCTTCAATGCATTAACCGGCCGAACCGACGAAGCCAACAAGCTATTGCAGGAACAAGCATTGAACCTGGGTCATCAGAGCCTGAATTCGGAAGCAGGAAACATCCAACAGCAGCAGAATAATGCAAACCCAAATGAGTTCTTGAGCTTGGAAACAGGACACCCTGAAGGTGGTGGTTCTGCTGCTGCAAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTTTACCTGCAAGAGTTGTTTCATCATCTTCGTCAACTTCACTGGATCAACATCAACAAAGTAATGCTGTGGAGTATAGGAATTCAGATGGAGCTATGTTCCCGGATGTTATGGAAACCTTTTTGGAGTGA	1338	0.488	MVGSGGGGGGGGGGTGERSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRSATSAGCLVEDMEGGGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFDSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSSIPIRPPAPLFNWPHRPSLPSSAASMLSSPNFAASRMGFPSKDSETHMFLMPHHHPHHQEHGARIEDMIGATNAGGGGGGGGDHDNDIKWPNGLSFFNALTGRTDEANKLLQEQALNLGHQSLNSEAGNIQQQQNNANPNEFLSLETGHPEGGGSAAARKMDKFKRSFTLPARVVSSSSSTSLDQHQQSNAVEYRNSDGAMFPDVMETFLE	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc153094g00001	445	MobiDBLite	consensus disorder prediction	409	430	-	-
	Stsc153094g00001	445	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	28	202	IPR025610	-
	Stsc153094g00001	445	PANTHER	GB\|AAF34833.1	12	445	IPR044170	-
	Stsc153094g00001	445	MobiDBLite	consensus disorder prediction	409	429	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc153094g00001	Stsc-Chr153094	363	3175	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc153094g00001	29	234	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G31280	30.435	3.71e-20	91.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc153094g00001	-		-	gmx:100814508	567.77